Structure Database (LMSD)
Common Name
type II A antigen(d18:1/16:0)
Systematic Name
GalNAcα1-3(Fucα1-2)Galβ1-4GlcNAcβ1-3Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/16:0)
Synonyms
LM ID
LMSP0505AQ01
Formula
Exact Mass
Calculate m/z
1941.019426
Sum Composition
Status
Active (generated by computational methods)
3D model of type II A antigen(d18:1/16:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
HTDVWLSMZWUQSG-UIXZCEROSA-N
InChi (Click to copy)
InChI=1S/C88H156N4O42/c1-7-9-11-13-15-17-19-21-23-25-27-29-31-33-48(103)47(92-56(104)34-32-30-28-26-24-22-20-18-16-14-12-10-8-2)42-119-84-71(116)69(114)76(55(41-99)127-84)129-87-73(118)78(63(108)51(37-95)123-87)132-82-58(90-45(5)101)66(111)74(53(39-97)125-82)128-86-72(117)77(62(107)50(36-94)122-86)131-83-59(91-46(6)102)67(112)75(54(40-98)126-83)130-88-80(134-85-70(115)68(113)60(105)43(3)120-85)79(64(109)52(38-96)124-88)133-81-57(89-44(4)100)65(110)61(106)49(35-93)121-81/h31,33,43,47-55,57-88,93-99,103,105-118H,7-30,32,34-42H2,1-6H3,(H,89,100)(H,90,101)(H,91,102)(H,92,104)/b33-31+/t43-,47+,48-,49-,50-,51-,52-,53-,54-,55-,57-,58-,59-,60-,61+,62+,63+,64+,65-,66-,67-,68-,69-,70+,71-,72-,73-,74-,75-,76-,77+,78+,79+,80-,81-,82+,83+,84-,85-,86+,87+,88+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@H]7O[C@H](CO)[C@H](O)[C@H](O)[C@H]7NC(=O)C)[C@H]6O[C@H]6O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
134
Rings
8
Aromatic Rings
0
Rotatable Bonds
56
Van der Waals Molecular Volume
1832.06
Topological Polar Surface Area
725.70
Hydrogen Bond Donors
26
Hydrogen Bond Acceptors
42
logP
7.92
Molar Refractivity
485.43
Admin
Created at
-
Updated at
26th Jul 2021