Structure Database (LMSD)

Common Name
type II A antigen(d18:1/22:0)
Systematic Name
GalNAcα1-3(Fucα1-2)Galβ1-4GlcNAcβ1-3Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/22:0)
Synonyms
LM ID
LMSP0505AQ04
Formula
Exact Mass
Calculate m/z
2025.113326
Sum Composition
Status
Active (generated by computational methods)

Classification

String Representations

InChiKey (Click to copy)
DMFAEDOUXHVZMH-KSCMCCMRSA-N
InChi (Click to copy)
InChI=1S/C94H168N4O42/c1-7-9-11-13-15-17-19-21-22-23-24-25-26-28-30-32-34-36-38-40-62(110)98-53(54(109)39-37-35-33-31-29-27-20-18-16-14-12-10-8-2)48-125-90-77(122)75(120)82(61(47-105)133-90)135-93-79(124)84(69(114)57(43-101)129-93)138-88-64(96-51(5)107)72(117)80(59(45-103)131-88)134-92-78(123)83(68(113)56(42-100)128-92)137-89-65(97-52(6)108)73(118)81(60(46-104)132-89)136-94-86(140-91-76(121)74(119)66(111)49(3)126-91)85(70(115)58(44-102)130-94)139-87-63(95-50(4)106)71(116)67(112)55(41-99)127-87/h37,39,49,53-61,63-94,99-105,109,111-124H,7-36,38,40-48H2,1-6H3,(H,95,106)(H,96,107)(H,97,108)(H,98,110)/b39-37+/t49-,53+,54-,55-,56-,57-,58-,59-,60-,61-,63-,64-,65-,66-,67+,68+,69+,70+,71-,72-,73-,74-,75-,76+,77-,78-,79-,80-,81-,82-,83+,84+,85+,86-,87-,88+,89+,90-,91-,92+,93+,94+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@H]7O[C@H](CO)[C@H](O)[C@H](O)[C@H]7NC(=O)C)[C@H]6O[C@H]6O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 140
Rings 8
Aromatic Rings 0
Rotatable Bonds 62
Van der Waals Molecular Volume 1935.86
Topological Polar Surface Area 725.70
Hydrogen Bond Donors 26
Hydrogen Bond Acceptors 42
logP 10.26
Molar Refractivity 513.13

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Created at
-
Updated at
26th Jul 2021