Structure Database (LMSD)

Common Name
type II A antigen(d18:1/26:0)
Systematic Name
GalNAcα1-3(Fucα1-2)Galβ1-4GlcNAcβ1-3Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/26:0)
Synonyms
LM ID
LMSP0505AQ06
Formula
Exact Mass
Calculate m/z
2081.175926
Sum Composition
Status
Active (generated by computational methods)

Classification

String Representations

InChiKey (Click to copy)
YBWQFSYSIGQPSM-ZPFPUPJVSA-N
InChi (Click to copy)
InChI=1S/C98H176N4O42/c1-7-9-11-13-15-17-19-21-22-23-24-25-26-27-28-29-30-32-34-36-38-40-42-44-66(114)102-57(58(113)43-41-39-37-35-33-31-20-18-16-14-12-10-8-2)52-129-94-81(126)79(124)86(65(51-109)137-94)139-97-83(128)88(73(118)61(47-105)133-97)142-92-68(100-55(5)111)76(121)84(63(49-107)135-92)138-96-82(127)87(72(117)60(46-104)132-96)141-93-69(101-56(6)112)77(122)85(64(50-108)136-93)140-98-90(144-95-80(125)78(123)70(115)53(3)130-95)89(74(119)62(48-106)134-98)143-91-67(99-54(4)110)75(120)71(116)59(45-103)131-91/h41,43,53,57-65,67-98,103-109,113,115-128H,7-40,42,44-52H2,1-6H3,(H,99,110)(H,100,111)(H,101,112)(H,102,114)/b43-41+/t53-,57+,58-,59-,60-,61-,62-,63-,64-,65-,67-,68-,69-,70-,71+,72+,73+,74+,75-,76-,77-,78-,79-,80+,81-,82-,83-,84-,85-,86-,87+,88+,89+,90-,91-,92+,93+,94-,95-,96+,97+,98+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@H]7O[C@H](CO)[C@H](O)[C@H](O)[C@H]7NC(=O)C)[C@H]6O[C@H]6O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 144
Rings 8
Aromatic Rings 0
Rotatable Bonds 66
Van der Waals Molecular Volume 2005.06
Topological Polar Surface Area 725.70
Hydrogen Bond Donors 26
Hydrogen Bond Acceptors 42
logP 11.82
Molar Refractivity 531.60

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Created at
-
Updated at
26th Jul 2021