Structure Database (LMSD)
Common Name
GalNAc-GD1a(d18:1/18:0)
Systematic Name
GalNAcβ1-4(NeuAcα2-3)Galβ1-3GalNAcβ1-4(NeuAcα2-3)Galβ1-4Glcβ-Cer(d18:1/18:0)
Synonyms
LM ID
LMSP0601BG02
Formula
Exact Mass
Calculate m/z
2040.051455
Sum Composition
Status
Active (generated by computational methods)
3D model of GalNAc-GD1a(d18:1/18:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
WTDCOPYPWORXAQ-VYUMBVDESA-N
InChi (Click to copy)
InChI=1S/C92H161N5O44/c1-7-9-11-13-15-17-19-21-22-24-26-28-30-32-34-36-62(114)97-51(52(109)35-33-31-29-27-25-23-20-18-16-14-12-10-8-2)46-128-86-73(121)72(120)76(59(43-102)131-86)134-87-74(122)82(140-91(89(124)125)37-53(110)63(93-47(3)105)80(138-91)67(115)55(112)39-98)78(61(45-104)132-87)136-85-66(96-50(6)108)79(70(118)58(42-101)130-85)137-88-75(123)83(77(60(44-103)133-88)135-84-65(95-49(5)107)71(119)69(117)57(41-100)129-84)141-92(90(126)127)38-54(111)64(94-48(4)106)81(139-92)68(116)56(113)40-99/h33,35,51-61,63-88,98-104,109-113,115-123H,7-32,34,36-46H2,1-6H3,(H,93,105)(H,94,106)(H,95,107)(H,96,108)(H,97,114)(H,124,125)(H,126,127)/b35-33+/t51-,52+,53-,54-,55+,56+,57+,58+,59+,60+,61+,63+,64+,65+,66+,67+,68+,69-,70-,71+,72+,73+,74+,75+,76+,77-,78-,79+,80+,81+,82+,83+,84-,85-,86+,87-,88-,91-,92-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O[C@@H]5O[C@H](CO)[C@H](O)[C@H](O)[C@H]5NC(=O)C)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
141
Rings
7
Aromatic Rings
0
Rotatable Bonds
63
Van der Waals Molecular Volume
1934.28
Topological Polar Surface Area
788.64
Hydrogen Bond Donors
28
Hydrogen Bond Acceptors
44
logP
7.55
Molar Refractivity
507.91
Admin
Created at
-
Updated at
26th Jul 2021