Structure Database (LMSD)
Common Name
GD1a (NeuAc/NeuGc)(d18:1/18:0)
Systematic Name
NeuAcα2-3Galβ1-3GalNAcβ1-4(NeuGcα2-3)Galβ1-4Glcβ-Cer(d18:1/18:0)
Synonyms
LM ID
LMSP0601BV02
Formula
Exact Mass
Calculate m/z
1852.966996
Sum Composition
Status
Active (generated by computational methods)
3D model of GD1a (NeuAc/NeuGc)(d18:1/18:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Main
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
GTFXEKLIJAJGAI-UEOVPOJASA-N
InChi (Click to copy)
InChI=1S/C84H148N4O40/c1-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-57(103)87-47(48(98)33-31-29-27-25-23-21-18-16-14-12-10-8-6-2)44-117-78-67(110)66(109)70(55(41-93)120-78)122-80-69(112)76(128-84(82(115)116)36-50(100)60(88-58(104)43-95)74(126-84)63(106)52(102)38-90)71(56(42-94)121-80)123-77-61(86-46(4)97)72(64(107)53(39-91)118-77)124-79-68(111)75(65(108)54(40-92)119-79)127-83(81(113)114)35-49(99)59(85-45(3)96)73(125-83)62(105)51(101)37-89/h31,33,47-56,59-80,89-95,98-102,105-112H,5-30,32,34-44H2,1-4H3,(H,85,96)(H,86,97)(H,87,103)(H,88,104)(H,113,114)(H,115,116)/b33-31+/t47-,48+,49-,50-,51+,52+,53+,54+,55+,56+,59+,60+,61+,62+,63+,64-,65-,66+,67+,68+,69+,70+,71-,72+,73+,74+,75-,76+,77-,78+,79-,80-,83-,84-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)CO)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
References
Calculated Physicochemical Properties
Heavy Atoms
128
Rings
6
Aromatic Rings
0
Rotatable Bonds
60
Van der Waals Molecular Volume
1764.72
Topological Polar Surface Area
718.78
Hydrogen Bond Donors
26
Hydrogen Bond Acceptors
40
logP
7.12
Molar Refractivity
462.53
Admin
Created at
-
Updated at
26th Jul 2021