Structure Database (LMSD)

O O OH HO O OH O O HO O NH OH O O O N H HO OH HO OH HO O O HO O HO OH HO O OH HO HO H OH O NH H OH OH HO O O OH O
Common Name
(KDN,Neu5Ac)GD1a 2(d18:1/24:1(15Z))
Systematic Name
KDNα2-3Galβ1-3(NeuAcα2-6)GalNAcβ1-4Galβ1-4Glcβ-Cer(d18:1/24:1(15Z))
Synonyms
LM ID
LMSP0601CD07
Formula
Exact Mass
Calculate m/z
1878.023782
Sum Composition
Status
Active (generated by computational methods)

Main

Classification

String Representations

InChiKey (Click to copy)
HMTXLDVLWIFTLC-BJYOWVJGSA-N
InChi (Click to copy)
InChI=1S/C88H155N3O39/c1-5-7-9-11-13-15-17-19-20-21-22-23-24-25-26-28-30-32-34-36-38-40-62(104)91-52(53(99)39-37-35-33-31-29-27-18-16-14-12-10-8-6-2)48-119-82-72(112)70(110)76(59(46-95)122-82)126-83-73(113)71(111)75(60(47-96)123-83)125-81-64(90-51(4)98)77(69(109)61(124-81)49-120-87(85(115)116)41-54(100)63(89-50(3)97)78(128-87)66(106)56(102)43-92)127-84-74(114)80(68(108)58(45-94)121-84)130-88(86(117)118)42-55(101)65(105)79(129-88)67(107)57(103)44-93/h19-20,37,39,52-61,63-84,92-96,99-103,105-114H,5-18,21-36,38,40-49H2,1-4H3,(H,89,97)(H,90,98)(H,91,104)(H,115,116)(H,117,118)/b20-19-,39-37+/t52-,53+,54-,55-,56+,57+,58+,59+,60+,61+,63+,64+,65+,66+,67+,68-,69-,70+,71+,72+,73+,74+,75-,76+,77+,78+,79+,80-,81-,82+,83-,84-,87+,88-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO[C@]4(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C4)C(O)=O)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](O)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC

References

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 130
Rings 6
Aromatic Rings 0
Rotatable Bonds 63
Van der Waals Molecular Volume 1814.13
Topological Polar Surface Area 689.68
Hydrogen Bond Donors 25
Hydrogen Bond Acceptors 39
logP 9.83
Molar Refractivity 476.63

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Created at
-
Updated at
26th Jul 2021