Structure Database (LMSD)
Common Name
GD1a (NeuGc/NeuGc)(d18:1/22:0)
Systematic Name
NeuGcα2-3Galβ1-3GalNAcβ1-4(NeuGcα2-3)Galβ1-4Glcβ-Cer(d18:1/22:0)
Synonyms
LM ID
LMSP0601CQ04
Formula
Exact Mass
Calculate m/z
1925.024511
Sum Composition
Status
Active (generated by computational methods)
3D model of GD1a (NeuGc/NeuGc)(d18:1/22:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
JVVGDDNRCTUEPC-OFGYRSQJSA-N
InChi (Click to copy)
InChI=1S/C88H156N4O41/c1-4-6-8-10-12-14-16-18-19-20-21-22-23-25-27-29-31-33-35-37-60(107)90-50(51(102)36-34-32-30-28-26-24-17-15-13-11-9-7-5-2)48-122-82-71(115)70(114)74(58(44-97)125-82)127-84-73(117)80(133-88(86(120)121)39-53(104)64(92-62(109)47-100)78(131-88)67(111)55(106)41-94)75(59(45-98)126-84)128-81-65(89-49(3)101)76(68(112)56(42-95)123-81)129-83-72(116)79(69(113)57(43-96)124-83)132-87(85(118)119)38-52(103)63(91-61(108)46-99)77(130-87)66(110)54(105)40-93/h34,36,50-59,63-84,93-100,102-106,110-117H,4-33,35,37-48H2,1-3H3,(H,89,101)(H,90,107)(H,91,108)(H,92,109)(H,118,119)(H,120,121)/b36-34+/t50-,51+,52-,53-,54+,55+,56+,57+,58+,59+,63+,64+,65+,66+,67+,68-,69-,70+,71+,72+,73+,74+,75-,76+,77+,78+,79-,80+,81-,82+,83-,84-,87-,88-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)CO)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)CO)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
133
Rings
6
Aromatic Rings
0
Rotatable Bonds
65
Van der Waals Molecular Volume
1842.71
Topological Polar Surface Area
739.01
Hydrogen Bond Donors
27
Hydrogen Bond Acceptors
41
logP
7.94
Molar Refractivity
482.90
Admin
Created at
-
Updated at
26th Jul 2021