Structure Database (LMSD)
Common Name
GD1a (NeuGc/NeuGc)(d18:1/24:0)
Systematic Name
NeuGcα2-3Galβ1-3GalNAcβ1-4(NeuGcα2-3)Galβ1-4Glcβ-Cer(d18:1/24:0)
Synonyms
LM ID
LMSP0601CQ05
Formula
Exact Mass
Calculate m/z
1953.055811
Sum Composition
Status
Active (generated by computational methods)
3D model of GD1a (NeuGc/NeuGc)(d18:1/24:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
KCABXFJLOJWTAM-GLMLDJRTSA-N
InChi (Click to copy)
InChI=1S/C90H160N4O41/c1-4-6-8-10-12-14-16-18-19-20-21-22-23-24-25-27-29-31-33-35-37-39-62(109)92-52(53(104)38-36-34-32-30-28-26-17-15-13-11-9-7-5-2)50-124-84-73(117)72(116)76(60(46-99)127-84)129-86-75(119)82(135-90(88(122)123)41-55(106)66(94-64(111)49-102)80(133-90)69(113)57(108)43-96)77(61(47-100)128-86)130-83-67(91-51(3)103)78(70(114)58(44-97)125-83)131-85-74(118)81(71(115)59(45-98)126-85)134-89(87(120)121)40-54(105)65(93-63(110)48-101)79(132-89)68(112)56(107)42-95/h36,38,52-61,65-86,95-102,104-108,112-119H,4-35,37,39-50H2,1-3H3,(H,91,103)(H,92,109)(H,93,110)(H,94,111)(H,120,121)(H,122,123)/b38-36+/t52-,53+,54-,55-,56+,57+,58+,59+,60+,61+,65+,66+,67+,68+,69+,70-,71-,72+,73+,74+,75+,76+,77-,78+,79+,80+,81-,82+,83-,84+,85-,86-,89-,90-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)CO)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)CO)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
135
Rings
6
Aromatic Rings
0
Rotatable Bonds
67
Van der Waals Molecular Volume
1877.31
Topological Polar Surface Area
739.01
Hydrogen Bond Donors
27
Hydrogen Bond Acceptors
41
logP
8.72
Molar Refractivity
492.13
Admin
Created at
-
Updated at
26th Jul 2021