Structure Database (LMSD)
Common Name
KDN-lactotetraosylceramide(d18:1/26:0)
Systematic Name
KDNα2-3Galβ1-3GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/26:0)
Synonyms
LM ID
LMSP0601EB06
Formula
Exact Mass
Calculate m/z
1616.975313
Sum Composition
Status
Active (generated by computational methods)
3D model of KDN-lactotetraosylceramide(d18:1/26:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Main
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
PMDFRKLPQYOVGL-DCNRKWSCSA-N
InChi (Click to copy)
InChI=1S/C79H144N2O31/c1-4-6-8-10-12-14-16-18-19-20-21-22-23-24-25-26-27-29-31-33-35-37-39-41-58(91)81-50(51(88)40-38-36-34-32-30-28-17-15-13-11-9-7-5-2)48-103-75-66(98)65(97)69(57(47-86)107-75)108-76-67(99)71(63(95)55(45-84)105-76)110-74-59(80-49(3)87)70(62(94)54(44-83)104-74)109-77-68(100)73(64(96)56(46-85)106-77)112-79(78(101)102)42-52(89)60(92)72(111-79)61(93)53(90)43-82/h38,40,50-57,59-77,82-86,88-90,92-100H,4-37,39,41-48H2,1-3H3,(H,80,87)(H,81,91)(H,101,102)/b40-38+/t50-,51+,52-,53+,54+,55+,56+,57+,59+,60+,61+,62+,63-,64-,65+,66+,67+,68+,69+,70+,71-,72+,73-,74-,75+,76-,77-,79-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](O)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
References
Calculated Physicochemical Properties
Heavy Atoms
112
Rings
5
Aromatic Rings
0
Rotatable Bonds
59
Van der Waals Molecular Volume
1597.39
Topological Polar Surface Area
542.06
Hydrogen Bond Donors
20
Hydrogen Bond Acceptors
31
logP
11.66
Molar Refractivity
420.97
Admin
Created at
-
Updated at
26th Jul 2021