Structure Database (LMSD)

Common Name
Tigogenin 3-O-alpha-L-rhamnopyranosyl(1->4)-beta-D-galactopyranosyl(1->3) -beta-D-xylopyranosyl(1->2)] -beta-D-glucopyranoside
Systematic Name
(25R)-5α-spirostan-3β-yl-α-L-rhamnopyranosyl(1->4)-β-D-galactopyranosyl(1->3) -β-D-xylopyranosyl(1->2)] -β-D-glucopyranoside
Synonyms
LM ID
LMST01080112
Formula
Exact Mass
Calculate m/z
1018.534865
Status
Active

Classification

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Magnoliopsida (#3398)
Structural characterization of three cytotoxic steroidal saponins from the leaves of Agave desmetiana hort.,
Phytochemistry, 2021
Pubmed ID: 34942559

String Representations

InChiKey (Click to copy)
XNNRMKPPWPALPP-ULTMKUKJSA-N
InChi (Click to copy)
InChI=1S/C50H82O21/c1-20-8-13-50(63-18-20)21(2)32-29(71-50)15-27-25-7-6-23-14-24(9-11-48(23,4)26(25)10-12-49(27,32)5)65-47-43(70-44-38(59)34(55)28(53)19-62-44)42(35(56)30(16-51)66-47)69-46-40(61)37(58)41(31(17-52)67-46)68-45-39(60)36(57)33(54)22(3)64-45/h20-47,51-61H,6-19H2,1-5H3/t20-,21+,22+,23+,24+,25-,26+,27+,28-,29+,30-,31-,32+,33+,34+,35-,36-,37-,38-,39+,40-,41+,42+,43-,44+,45-,46+,47-,48+,49+,50-/m1/s1
SMILES (Click to copy)
C1[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@H]5[C@@H]([C@]6(O[C@H]5C[C@@]4([H])[C@]3([H])CC[C@@]2([H])C[C@@H](O[C@H]2[C@H](O[C@H]3[C@H](O)[C@@H](O)[C@H](O)CO3)[C@@H](O[C@H]3[C@H](O)[C@@H](O)[C@@H](O[C@@H]4[C@@H](O)[C@H](O)[C@@H](O)[C@H](C)O4)[C@@H](CO)O3)[C@H](O)[C@@H](CO)O2)C1)CC[C@@H](C)CO6)C

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 71
Rings 10
Aromatic Rings
Rotatable Bonds 10
Van der Waals Molecular Volume 934.55
Topological Polar Surface Area 327.25
Hydrogen Bond Donors 11
Hydrogen Bond Acceptors 21
logP 6.20
Molar Refractivity 254.06

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Created at
12th Jan 2022
Updated at
12th Jan 2022