Structure Database (LMSD)
Common Name
GD1a(d18:1/22:0)
Systematic Name
NeuAcα2-3Galβ1-3GalNAcβ1-4(NeuAcα2-3)Galβ1-4Glcβ-Cer(d18:1/22:0)
Synonyms
LM ID
LMSP0601AS04
Formula
Exact Mass
Calculate m/z
1893.034681
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of GD1a(d18:1/22:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Main
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
BFLPUKRPRZRARE-ALVQOSIFSA-N
InChi (Click to copy)
InChI=1S/C88H156N4O39/c1-6-8-10-12-14-16-18-20-21-22-23-24-25-27-29-31-33-35-37-39-62(107)92-52(53(102)38-36-34-32-30-28-26-19-17-15-13-11-9-7-2)48-120-82-71(113)70(112)74(60(46-97)123-82)125-84-73(115)80(131-88(86(118)119)41-55(104)64(90-50(4)100)78(129-88)67(109)57(106)43-94)75(61(47-98)124-84)126-81-65(91-51(5)101)76(68(110)58(44-95)121-81)127-83-72(114)79(69(111)59(45-96)122-83)130-87(85(116)117)40-54(103)63(89-49(3)99)77(128-87)66(108)56(105)42-93/h36,38,52-61,63-84,93-98,102-106,108-115H,6-35,37,39-48H2,1-5H3,(H,89,99)(H,90,100)(H,91,101)(H,92,107)(H,116,117)(H,118,119)/b38-36+/t52-,53+,54-,55-,56+,57+,58+,59+,60+,61+,63+,64+,65+,66+,67+,68-,69-,70+,71+,72+,73+,74+,75-,76+,77+,78+,79-,80+,81-,82+,83-,84-,87-,88-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
References
Calculated Physicochemical Properties
Heavy Atoms
131
Rings
6
Aromatic Rings
0
Rotatable Bonds
63
Van der Waals Molecular Volume
1825.13
Topological Polar Surface Area
698.55
Hydrogen Bond Donors
25
Hydrogen Bond Acceptors
39
logP
9.42
Molar Refractivity
479.09
Reactions
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Admin
Created at
-
Updated at
26th Jul 2021