Structure Database (LMSD)
Common Name
GT1c(d18:1/24:0)
Systematic Name
Galβ1-3GalNAcβ1-4(NeuAcα2-8NeuAcα2-8NeuAcα2-3)Galβ1-4Glcβ-Cer(d18:1/24:0)
Synonyms
LM ID
LMSP0601AR05
Formula
Exact Mass
Calculate m/z
2212.1614
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of GT1c(d18:1/24:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Reactions
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Reactions are shown if the E.C. number of the enzyme catalysing it is annotated in the UniProt database for a species belonging to the selected taxonomic class.
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String Representations
InChiKey (Click to copy)
CLRPGRXOMZPQPN-FGDHTNIISA-N
InChi (Click to copy)
InChI=1S/C101H177N5O47/c1-7-9-11-13-15-17-19-21-22-23-24-25-26-27-28-30-32-34-36-38-40-42-70(123)106-58(59(118)41-39-37-35-33-31-29-20-18-16-14-12-10-8-2)53-140-93-83(132)81(130)85(68(51-112)143-93)145-95-84(133)91(86(69(52-113)144-95)146-92-74(105-57(6)117)87(77(126)65(48-109)141-92)147-94-82(131)80(129)76(125)64(47-108)142-94)153-101(98(138)139)45-62(121)73(104-56(5)116)90(152-101)79(128)67(50-111)149-100(97(136)137)44-61(120)72(103-55(4)115)89(151-100)78(127)66(49-110)148-99(96(134)135)43-60(119)71(102-54(3)114)88(150-99)75(124)63(122)46-107/h39,41,58-69,71-95,107-113,118-122,124-133H,7-38,40,42-53H2,1-6H3,(H,102,114)(H,103,115)(H,104,116)(H,105,117)(H,106,123)(H,134,135)(H,136,137)(H,138,139)/b41-39+/t58-,59+,60-,61-,62-,63+,64+,65+,66+,67+,68+,69+,71+,72+,73+,74+,75+,76-,77-,78+,79+,80-,81+,82+,83+,84+,85+,86-,87+,88+,89+,90+,91+,92-,93+,94-,95-,99+,100+,101-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@@H]([C@@H]([C@@H]([C@H]3NC(C)=O)O[C@H]3[C@H](O)[C@@H](O)[C@@H](O)[C@@H](CO)O3)O)CO)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O[C@]4(O[C@@]([H])([C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)CO)[C@H](NC(=O)C)[C@@H](O)C4)C(O)=O)CO)[C@H](NC(=O)C)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
153
Rings
7
Aromatic Rings
0
Rotatable Bonds
72
Van der Waals Molecular Volume
2113.71
Topological Polar Surface Area
846.17
Hydrogen Bond Donors
30
Hydrogen Bond Acceptors
52
logP
9.38
Molar Refractivity
553.32
Admin
Created at
-
Updated at
26th Aug 2021