Structure Database (LMSD)
Common Name
(KDN,Neu5Ac)GD1a 2(d18:1/26:1(17Z))
Systematic Name
KDNα2-3Galβ1-3(NeuAcα2-6)GalNAcβ1-4Galβ1-4Glcβ-Cer(d18:1/26:1(17Z))
Synonyms
LM ID
LMSP0601CD08
Formula
Exact Mass
Calculate m/z
1906.055082
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of (KDN,Neu5Ac)GD1a 2(d18:1/26:1(17Z))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
DUBVPYFMYPBHPP-ZJPBBISQSA-N
InChi (Click to copy)
InChI=1S/C90H159N3O39/c1-5-7-9-11-13-15-17-19-20-21-22-23-24-25-26-27-28-30-32-34-36-38-40-42-64(106)93-54(55(101)41-39-37-35-33-31-29-18-16-14-12-10-8-6-2)50-121-84-74(114)72(112)78(61(48-97)124-84)128-85-75(115)73(113)77(62(49-98)125-85)127-83-66(92-53(4)100)79(71(111)63(126-83)51-122-89(87(117)118)43-56(102)65(91-52(3)99)80(130-89)68(108)58(104)45-94)129-86-76(116)82(70(110)60(47-96)123-86)132-90(88(119)120)44-57(103)67(107)81(131-90)69(109)59(105)46-95/h19-20,39,41,54-63,65-86,94-98,101-105,107-116H,5-18,21-38,40,42-51H2,1-4H3,(H,91,99)(H,92,100)(H,93,106)(H,117,118)(H,119,120)/b20-19-,41-39+/t54-,55+,56-,57-,58+,59+,60+,61+,62+,63+,65+,66+,67+,68+,69+,70-,71-,72+,73+,74+,75+,76+,77-,78+,79+,80+,81+,82-,83-,84+,85-,86-,89+,90-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO[C@]4(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C4)C(O)=O)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](O)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
132
Rings
6
Aromatic Rings
0
Rotatable Bonds
65
Van der Waals Molecular Volume
1848.73
Topological Polar Surface Area
689.68
Hydrogen Bond Donors
25
Hydrogen Bond Acceptors
39
logP
10.62
Molar Refractivity
485.87
Admin
Created at
-
Updated at
26th Jul 2021