Structure Database (LMSD)
Common Name
I antigen(d18:1/16:0)
Systematic Name
Galβ1-4GlcNAcβ1-3(Galβ1-4GlcNAcβ1-6)Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/16:0)
Synonyms
LM ID
LMSP0505AP01
Formula
Exact Mass
Calculate m/z
1957.014341
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of I antigen(d18:1/16:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
HBIVKNBXZPJCSV-HYAJBGEXSA-N
InChi (Click to copy)
InChI=1S/C88H156N4O43/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-47(103)46(92-56(104)33-31-29-27-25-23-21-19-17-15-13-11-9-7-2)41-120-84-72(117)69(114)78(54(40-99)128-84)133-87-73(118)79(62(107)50(36-95)124-87)134-82-59(91-45(5)102)66(111)77(53(39-98)127-82)132-88-74(119)80(135-83-58(90-44(4)101)65(110)76(52(38-97)126-83)131-86-71(116)68(113)61(106)49(35-94)123-86)63(108)55(129-88)42-121-81-57(89-43(3)100)64(109)75(51(37-96)125-81)130-85-70(115)67(112)60(105)48(34-93)122-85/h30,32,46-55,57-88,93-99,103,105-119H,6-29,31,33-42H2,1-5H3,(H,89,100)(H,90,101)(H,91,102)(H,92,104)/b32-30+/t46-,47+,48+,49+,50+,51+,52+,53+,54+,55+,57+,58+,59+,60-,61-,62-,63-,64+,65+,66+,67-,68-,69+,70+,71+,72+,73+,74+,75+,76+,77+,78+,79-,80-,81+,82-,83-,84+,85-,86-,87-,88-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O)[C@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O)[C@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
135
Rings
8
Aromatic Rings
0
Rotatable Bonds
57
Van der Waals Molecular Volume
1840.85
Topological Polar Surface Area
745.93
Hydrogen Bond Donors
27
Hydrogen Bond Acceptors
43
logP
7.18
Molar Refractivity
487.33
Admin
Created at
-
Updated at
26th Jul 2021