Structure Database (LMSD)
Common Name
VI 3GalNAca-IV 6kladoLcOse8(d18:1/26:1(17Z))
Systematic Name
GalNAcα1-3Galβ1-4GlcNAcβ1-3(Galβ1-4GlcNAcβ1-6)Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/26:1(17Z))
Synonyms
LM ID
LMSP0505EM08
Formula
Exact Mass
Calculate m/z
2298.234565
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of VI 3GalNAca-IV 6kladoLcOse8(d18:1/26:1(17Z))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
HDCKBVYICZHMRH-OHJSWSLMSA-N
InChi (Click to copy)
InChI=1S/C106H187N5O48/c1-7-9-11-13-15-17-19-21-22-23-24-25-26-27-28-29-30-32-34-36-38-40-42-44-70(125)111-59(60(124)43-41-39-37-35-33-31-20-18-16-14-12-10-8-2)53-142-102-87(138)85(136)94(68(52-119)151-102)156-105-89(140)96(78(129)64(48-115)147-105)158-100-73(109-57(5)122)83(134)93(67(51-118)149-100)155-106-90(141)97(79(130)69(152-106)54-143-98-72(108-56(4)121)81(132)91(65(49-116)148-98)153-103-86(137)84(135)76(127)62(46-113)145-103)159-101-74(110-58(6)123)82(133)92(66(50-117)150-101)154-104-88(139)95(77(128)63(47-114)146-104)157-99-71(107-55(3)120)80(131)75(126)61(45-112)144-99/h21-22,41,43,59-69,71-106,112-119,124,126-141H,7-20,23-40,42,44-54H2,1-6H3,(H,107,120)(H,108,121)(H,109,122)(H,110,123)(H,111,125)/b22-21-,43-41+/t59-,60+,61+,62+,63+,64+,65+,66+,67+,68+,69+,71+,72+,73+,74+,75-,76-,77-,78-,79-,80+,81+,82+,83+,84-,85+,86+,87+,88+,89+,90+,91+,92+,93+,94+,95-,96-,97-,98+,99+,100-,101-,102+,103-,104-,105-,106-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O)[C@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@H]7O[C@H](CO)[C@H](O)[C@H](O)[C@H]7NC(=O)C)[C@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
159
Rings
9
Aromatic Rings
0
Rotatable Bonds
70
Van der Waals Molecular Volume
2189.56
Topological Polar Surface Area
836.02
Hydrogen Bond Donors
30
Hydrogen Bond Acceptors
48
logP
10.54
Molar Refractivity
580.69
Admin
Created at
-
Updated at
26th Jul 2021