Structure Database (LMSD)

Common Name
iGb5(d18:1/24:0)
Systematic Name
Galβ1-3GalNAcβ1-3Galα1-3Galβ1-4Glcβ-Cer(d18:1/24:0)
Synonyms
LM ID
LMSP0506AS05
Formula
C74H136N2O28
Exact Mass
Calculate m/z
1500.927968
Status
Active (generated by computational methods)
Show lipids differing only in stereochemistry/bond geometry

Classification

Category
Main Class
Sub Class
Sphingolipids [SP]
Neutral glycosphingolipids [SP05]
Galalpha1-3Galbeta1-4Glc- (Isoglobo series) [SP0506]

String Representations

InChiKey (Click to copy)
LNXXPZRMWAEUBV-VFZBOSBISA-N
InChi (Click to copy)
InChI=1S/C74H136N2O28/c1-4-6-8-10-12-14-16-18-19-20-21-22-23-24-25-27-29-31-33-35-37-39-54(84)76-47(48(83)38-36-34-32-30-28-26-17-15-13-11-9-7-5-2)45-95-71-63(92)61(90)66(53(44-81)100-71)101-73-65(94)69(59(88)52(43-80)98-73)104-74-64(93)68(58(87)51(42-79)99-74)103-70-55(75-46(3)82)67(57(86)50(41-78)96-70)102-72-62(91)60(89)56(85)49(40-77)97-72/h36,38,47-53,55-74,77-81,83,85-94H,4-35,37,39-45H2,1-3H3,(H,75,82)(H,76,84)/b38-36+/t47-,48+,49+,50+,51+,52+,53+,55+,56-,57-,58-,59-,60-,61+,62+,63+,64+,65+,66+,67+,68-,69-,70-,71+,72-,73-,74+/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@H](O)[C@H](O)[C@H]5O)[C@H]4NC(=O)C)[C@H]3O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC

Other Databases

PubChem CID
44261584

Calculated Physicochemical Properties

Heavy Atoms 104
Rings 5
Aromatic Rings 0
Rotatable Bonds 54
Van der Waals Molecular Volume 1487.16
Topological Polar Surface Area 484.53
Hydrogen Bond Donors 18
Hydrogen Bond Acceptors 28
logP 11.39
Molar Refractivity 394.02

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Created at
-
Updated at
26th Jul 2021