Structure Database (LMSD)
Common Name
VIM-II(d18:1/24:1(15Z))
Systematic Name
NeuAcα2-3Galβ1-4GlcNAcβ1-3Galβ1-4(Fucα1-3)GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/24:1(15Z))
Synonyms
LM ID
LMSP0601FJ07
Formula
Exact Mass
Calculate m/z
2139.145021
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of VIM-II(d18:1/24:1(15Z))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
RMZONKOEEIKPKI-LSKLBGATSA-N
InChi (Click to copy)
InChI=1S/C99H174N4O45/c1-7-9-11-13-15-17-19-21-22-23-24-25-26-27-28-30-32-34-36-38-40-42-66(117)103-56(57(114)41-39-37-35-33-31-29-20-18-16-14-12-10-8-2)51-133-93-79(127)77(125)84(64(49-109)140-93)142-95-80(128)89(73(121)60(45-105)135-95)146-92-69(102-55(6)113)87(144-94-78(126)76(124)70(118)52(3)134-94)85(65(50-110)139-92)143-96-81(129)88(72(120)61(46-106)136-96)145-91-68(101-54(5)112)75(123)83(63(48-108)138-91)141-97-82(130)90(74(122)62(47-107)137-97)148-99(98(131)132)43-58(115)67(100-53(4)111)86(147-99)71(119)59(116)44-104/h21-22,39,41,52,56-65,67-97,104-110,114-116,118-130H,7-20,23-38,40,42-51H2,1-6H3,(H,100,111)(H,101,112)(H,102,113)(H,103,117)(H,131,132)/b22-21-,41-39+/t52-,56+,57-,58+,59-,60-,61-,62-,63-,64-,65-,67-,68-,69-,70-,71-,72+,73+,74+,75-,76-,77-,78+,79-,80-,81-,82-,83-,84-,85-,86-,87-,88+,89+,90+,91+,92+,93-,94-,95+,96+,97+,99+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@]7(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C7)C(O)=O)[C@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O[C@H]4O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]4O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
148
Rings
8
Aromatic Rings
0
Rotatable Bonds
66
Van der Waals Molecular Volume
2043.45
Topological Polar Surface Area
783.23
Hydrogen Bond Donors
28
Hydrogen Bond Acceptors
45
logP
10.31
Molar Refractivity
539.98
Admin
Created at
-
Updated at
26th Jul 2021