Structure Database (LMSD)
Common Name
VIM-II(d18:1/18:0)
Systematic Name
NeuAcα2-3Galβ1-4GlcNAcβ1-3Galβ1-4(Fucα1-3)GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/18:0)
Synonyms
LM ID
LMSP0601FJ02
Formula
Exact Mass
Calculate m/z
2057.066771
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of VIM-II(d18:1/18:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
SYASTWJPSWUDMO-FQUYSKEYSA-N
InChi (Click to copy)
InChI=1S/C93H164N4O45/c1-7-9-11-13-15-17-19-21-22-24-26-28-30-32-34-36-60(111)97-50(51(108)35-33-31-29-27-25-23-20-18-16-14-12-10-8-2)45-127-87-73(121)71(119)78(58(43-103)134-87)136-89-74(122)83(67(115)54(39-99)129-89)140-86-63(96-49(6)107)81(138-88-72(120)70(118)64(112)46(3)128-88)79(59(44-104)133-86)137-90-75(123)82(66(114)55(40-100)130-90)139-85-62(95-48(5)106)69(117)77(57(42-102)132-85)135-91-76(124)84(68(116)56(41-101)131-91)142-93(92(125)126)37-52(109)61(94-47(4)105)80(141-93)65(113)53(110)38-98/h33,35,46,50-59,61-91,98-104,108-110,112-124H,7-32,34,36-45H2,1-6H3,(H,94,105)(H,95,106)(H,96,107)(H,97,111)(H,125,126)/b35-33+/t46-,50+,51-,52+,53-,54-,55-,56-,57-,58-,59-,61-,62-,63-,64-,65-,66+,67+,68+,69-,70-,71-,72+,73-,74-,75-,76-,77-,78-,79-,80-,81-,82+,83+,84+,85+,86+,87-,88-,89+,90+,91+,93+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@]7(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C7)C(O)=O)[C@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O[C@H]4O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]4O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
142
Rings
8
Aromatic Rings
0
Rotatable Bonds
61
Van der Waals Molecular Volume
1942.29
Topological Polar Surface Area
783.23
Hydrogen Bond Donors
28
Hydrogen Bond Acceptors
45
logP
8.19
Molar Refractivity
512.38
Admin
Created at
-
Updated at
26th Jul 2021