Structure Database (LMSD)
Systematic Name
GalNAcβ1-4(NeuAcα2-3)Galβ1-3GlcNAcβ1-3(GalNAcβ1-4)Galβ1-4Glcβ-Cer(d18:1/26:1(17Z))
Synonyms
LM ID
LMSP0601DQ08
Formula
Exact Mass
Calculate m/z
2062.14496
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
VOGOZHJZWUYKQF-GVNXIRHYSA-N
InChi (Click to copy)
InChI=1S/C97H171N5O41/c1-7-9-11-13-15-17-19-21-22-23-24-25-26-27-28-29-30-32-34-36-38-40-42-44-68(117)102-58(59(114)43-41-39-37-35-33-31-20-18-16-14-12-10-8-2)53-130-93-80(125)79(124)83(65(50-107)134-93)137-94-81(126)88(84(66(51-108)135-94)138-90-70(99-55(4)111)77(122)74(119)62(47-104)131-90)141-92-72(101-57(6)113)86(76(121)64(49-106)133-92)140-95-82(127)89(85(67(52-109)136-95)139-91-71(100-56(5)112)78(123)75(120)63(48-105)132-91)143-97(96(128)129)45-60(115)69(98-54(3)110)87(142-97)73(118)61(116)46-103/h21-22,41,43,58-67,69-95,103-109,114-116,118-127H,7-20,23-40,42,44-53H2,1-6H3,(H,98,110)(H,99,111)(H,100,112)(H,101,113)(H,102,117)(H,128,129)/b22-21-,43-41+/t58-,59+,60-,61+,62+,63+,64+,65+,66+,67+,69+,70+,71+,72+,73+,74-,75-,76+,77+,78+,79+,80+,81+,82+,83+,84-,85-,86+,87+,88+,89+,90-,91-,92-,93+,94-,95-,97-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3NC(=O)C)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O[C@@H]5O[C@H](CO)[C@H](O)[C@H](O)[C@H]5NC(=O)C)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
143
Rings
7
Aromatic Rings
0
Rotatable Bonds
67
Van der Waals Molecular Volume
1994.41
Topological Polar Surface Area
731.11
Hydrogen Bond Donors
26
Hydrogen Bond Acceptors
41
logP
10.95
Molar Refractivity
527.03
Admin
Created at
-
Updated at
26th Jul 2021