Structure Database (LMSD)
Common Name
GD1a (NeuGc/NeuGc)(d18:1/20:0)
Systematic Name
NeuGcα2-3Galβ1-3GalNAcβ1-4(NeuGcα2-3)Galβ1-4Glcβ-Cer(d18:1/20:0)
Synonyms
LM ID
LMSP0601CQ03
Formula
Exact Mass
Calculate m/z
1896.993211
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of GD1a (NeuGc/NeuGc)(d18:1/20:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
WRLBWBJWCKRPHJ-KMENKKMWSA-N
InChi (Click to copy)
InChI=1S/C86H152N4O41/c1-4-6-8-10-12-14-16-18-19-20-21-23-25-27-29-31-33-35-58(105)88-48(49(100)34-32-30-28-26-24-22-17-15-13-11-9-7-5-2)46-120-80-69(113)68(112)72(56(42-95)123-80)125-82-71(115)78(131-86(84(118)119)37-51(102)62(90-60(107)45-98)76(129-86)65(109)53(104)39-92)73(57(43-96)124-82)126-79-63(87-47(3)99)74(66(110)54(40-93)121-79)127-81-70(114)77(67(111)55(41-94)122-81)130-85(83(116)117)36-50(101)61(89-59(106)44-97)75(128-85)64(108)52(103)38-91/h32,34,48-57,61-82,91-98,100-104,108-115H,4-31,33,35-46H2,1-3H3,(H,87,99)(H,88,105)(H,89,106)(H,90,107)(H,116,117)(H,118,119)/b34-32+/t48-,49+,50-,51-,52+,53+,54+,55+,56+,57+,61+,62+,63+,64+,65+,66-,67-,68+,69+,70+,71+,72+,73-,74+,75+,76+,77-,78+,79-,80+,81-,82-,85-,86-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)CO)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)CO)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
131
Rings
6
Aromatic Rings
0
Rotatable Bonds
63
Van der Waals Molecular Volume
1808.11
Topological Polar Surface Area
739.01
Hydrogen Bond Donors
27
Hydrogen Bond Acceptors
41
logP
7.16
Molar Refractivity
473.66
Admin
Created at
-
Updated at
26th Jul 2021