Structure Database (LMSD)
Systematic Name
GalNAcα1-3(Fucα1-2)Galβ1-3GlcNAcβ1-3(Galβ1-3GlcNAcβ1-6)Galβ1-3GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/18:0)
Synonyms
LM ID
LMSP0504BG02
Formula
Exact Mass
Calculate m/z
2334.182925
Sum Composition
Status
Active (generated by computational methods)
No other lipid differing only in stereochemistry/bond geometry found
3D model of
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
XIGCPOAMSKEJCA-CCBNXXQASA-N
InChi (Click to copy)
InChI=1S/C104H183N5O52/c1-8-10-12-14-16-18-20-22-23-25-27-29-31-33-35-37-64(123)109-53(54(122)36-34-32-30-28-26-24-21-19-17-15-13-11-9-2)46-142-99-84(139)81(136)87(62(45-117)152-99)154-102-85(140)91(75(130)60(43-115)150-102)158-97-67(107-51(6)120)89(73(128)58(41-113)147-97)156-103-86(141)92(77(132)63(153-103)47-143-95-66(106-50(5)119)88(72(127)57(40-112)145-95)155-101-83(138)80(135)71(126)56(39-111)149-101)159-98-68(108-52(7)121)90(74(129)59(42-114)148-98)157-104-94(161-100-82(137)79(134)69(124)48(3)144-100)93(76(131)61(44-116)151-104)160-96-65(105-49(4)118)78(133)70(125)55(38-110)146-96/h34,36,48,53-63,65-104,110-117,122,124-141H,8-33,35,37-47H2,1-7H3,(H,105,118)(H,106,119)(H,107,120)(H,108,121)(H,109,123)/b36-34+/t48-,53+,54-,55-,56-,57-,58-,59-,60-,61-,62-,63-,65-,66-,67-,68-,69-,70+,71+,72-,73-,74-,75+,76+,77+,78-,79-,80+,81-,82+,83-,84-,85-,86-,87-,88-,89-,90-,91+,92+,93+,94-,95-,96-,97+,98+,99-,100-,101+,102+,103+,104+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O[C@@H]4O[C@H](CO[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O)[C@H]6O)[C@H]5NC(=O)C)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@H]7O[C@H](CO)[C@H](O)[C@H](O)[C@H]7NC(=O)C)[C@H]6O[C@H]6O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]6O)[C@H]5NC(=O)C)[C@H]4O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
161
Rings
10
Aromatic Rings
0
Rotatable Bonds
65
Van der Waals Molecular Volume
2180.40
Topological Polar Surface Area
897.01
Hydrogen Bond Donors
32
Hydrogen Bond Acceptors
52
logP
7.93
Molar Refractivity
577.63
Admin
Created at
-
Updated at
26th Jul 2021