Section 1 (Lipid oriented databases)
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LIPID MAPS® Structure Database (LMSD) | LIPID MAPS® Computationally-generated Bulk Lipids (COMP_DB) | LIPID MAPS® Lipidomic Ion Mobility Database | LIPID MAPS® In-Silico Structure Database (LMISSD) | SwissLipids Knowledgebase |
|---|---|---|---|---|---|
| Number of lipid structures | 47 313 | 59 258 | 1 103 | 1 132 490 | 777 956 |
| Covered lipid sub classes | 8/8 | 8/8 | 7/8 | 3/8 | 8/8 |
| Ontology | LIPID MAPS classification | LIPID MAPS classification | LIPID MAPS classification | LIPID MAPS classification | LIPID MAPS classification |
| Level of curation | Manual & Computational | Computational | Manual | Computational | Manual & Computational |
| Level of annotation | Structure defined | Species | Structure defined | Structure defined | Structure defined |
| Main identifier | LMID | Shorthand at bulk level | LMID | LMID | SLM |
| Spectra libraires | MoNA MS spectra | no | no | no | no |
| Searchable by | Structure, formula, m/z, exact mass | m/z | Class, name | Exact mass | UniProtKB, gene names, HMDB ID, LMID ID, ChEBI ID, InChIKey, SMILES, formula, abbreviation, exact mass, name |