Structure Drawing Tools

MS Analysis
Structure Drawing Tools
Statistical Analysis Tools
Nomenclature Tools
Lipid Analysis Software
Lipidomics Tools Guide

Draw and save complex lipid structures using either a simple menu-based interface or by entering an abbreviation (where appropriate). Structures are rendered with Javascript / Ketcher and may be saved as molfiles.

Create a Sphingolipid Glycan Structure

Core
Core chain style
Glycan
Glycan chain orientation

Usage

Sugar residues allowed
Glc, Gal, Man, GlcNAc, GalNAc, Xyl, Fuc, NeuAc, NeuGc, KDN
Glycan sequence must be in the format
[sugar (as an abbreviation)][anomer (either a or b)][linkage in (x-y form)]
Examples
Galb1-4Glcb, Fuca1-2Galb1-3GalNAcb1-4Galb1-4Glcb, NeuAca2-3Galb1-3GalNAcb1-3Gala1-4Galb1-4Glcb
Branched glycans are designated by parentheses
GalNAca1-3GalNAcb1-3(Galb1-3GalNAcb1-4)Gala1-4Galb1-4Glcb
(The hypothetical structure below contains all 10 sugar residues currently supported) Example Structure