Structure Database (LMSD)

Common Name
PGF1alpha
Systematic Name
9S,11R,15S-trihydroxy-13E-prostaenoic acid
Synonyms
  • Prostaglandin F1alpha
LM ID
LMFA03010137
Formula
Exact Mass
Calculate m/z
356.256275
Sum Composition
Status
Curated


Classification

Biological Context

Prostaglandin F1α (PGF1α) is the putative metabolite of dihomo-γ-linolenic acid (DGLA) via the cyclooxygenase (COX) pathway. Both PGF1α and PGF2α have been shown to act as priming pheromones for male Atlantic salmon with a threshold concentration of 10−11 M.1 PGF1α binds to the ovine corpus luteum FP receptor at only 8% of the relative potency of PGF2α.2 It is only half as active as PGF2α in inducing human respiratory smooth muscle contractions in vitro.3

This information has been provided by Cayman Chemical

References

1. Moore, A., and Waring, C.P. Electrophysiological and endocrinological evidence that F-series prostaglandins function as priming pheromones in mature male Atlantic salmon (Salmo salar) PARR. J. Exp. Biol. 199(Pt 10), 2307-2316 (1996).
2. Karim, S.M.M., Adaikan, P.G., and Kottegoda, S.R. Prostaglandins and human respiratory tract smooth muscle: Structure activity relationship. Adv. Prostaglandin Thromboxane Res. 7, 969-980 (1980).
3. Balapure, A.K., Rexroad, C.E., Jr., Kawada, K., et al. Structural requirements for prostaglandin analog interaction with the ovine corpus luteum prostaglandin F2α receptor. Biochem. Pharmacol. 38(14), 2375-2381 (1989).

String Representations

InChiKey (Click to copy)
DZUXGQBLFALXCR-CDIPTNKSSA-N
InChi (Click to copy)
InChI=1S/C20H36O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h12-13,15-19,21-23H,2-11,14H2,1H3,(H,24,25)/b13-12+/t15-,16+,17+,18-,19+/m0/s1
SMILES (Click to copy)
[C@H]1(/C=C/[C@@H](O)CCCCC)[C@H](O)C[C@H](O)[C@@H]1CCCCCCC(=O)O

Other Databases

KEGG ID
HMDB ID
CHEBI ID
LIPIDBANK ID
XPR1500
PubChem CID
Cayman ID
GuidePharm ID

Calculated Physicochemical Properties

Heavy Atoms 25
Rings 1
Aromatic Rings 0
Rotatable Bonds 13
Van der Waals Molecular Volume 380.87
Topological Polar Surface Area 97.99
Hydrogen Bond Donors 4
Hydrogen Bond Acceptors 5
logP 4.13
Molar Refractivity 99.77

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Updated at
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