Structure Database (LMSD)
Common Name
Avicularin
Systematic Name
Synonyms
- Quercetin 3-alpha-L-arabinofuranoside
3D model of Avicularin
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Biological Context
Avicularin is a flavonoid glycoside that has been found in R. sachalinensis and has diverse biological activities.1,2,3,4,5 It inhibits fatty acid synthase (FASN) and aldose reductase (IC50s = 6.15 and 19.05 µM for the chicken liver and human enzymes, respectively).1,2 Avicularin scavenges DPPH and superoxide radicals, as well as inhibits copper-induced oxidation of LDL in cell-free assays (IC50s = 64.3, 6, and 3.8 µM, respectively).3 It inhibits LPS-induced increases in nitric oxide (NO) and prostaglandin E2 (PGE2) production in RAW 264.7 macrophages when used at concentrations ranging from 30 to 300 µM.4 Avicularin (100 µg/ml) inhibits the proliferation, migration, and invasion of, as well as induces apoptosis and cell cycle arrest at the G0/G1 phase in, Huh7 hepatocellular carcinoma cells.5
This information has been provided by Cayman Chemical
References
2. Vo, V.A., Lee, J.-W., Chang, J.-E., et al. Avicularin inhibits lipopolysaccharide-induced inflammatory response by suppressing ERK phosphorylation in RAW 264.7 macrophages. Biomol. Ther. (Seoul) 20(6), 532-537 (2012).
4. Naeem, S., Hylands, P., and Barlow, D. Construction of an Indonesian herbal constituents database and its use in Random Forest modelling in a search for inhibitors of aldose reductase. Bioorg. Med. Chem. 20(3), 1251-1258 (2012).
5. Abramson, H.N. The lipogenesis pathway as a cancer target. J. Med. Chem. 54(16), 5615-5638 (2011).
References
Taxonomy Information
Curated from
NCBI taxonomy class
Reference
Viridiplantae
(#33090)
Flavonoid imported from http://metabolomics.jp/
String Representations
InChiKey (Click to copy)
BDCDNTVZSILEOY-UXYNSRGZSA-N
InChi (Click to copy)
InChI=1S/C20H18O11/c21-6-13-15(26)17(28)20(30-13)31-19-16(27)14-11(25)4-8(22)5-12(14)29-18(19)7-1-2-9(23)10(24)3-7/h1-5,13,15,17,20-26,28H,6H2/t13-,15-,17+,20-/m0/s1
SMILES (Click to copy)
C1(O)=CC2OC(C3C=C(O)C(O)=CC=3)=C(O[C@@H]3O[C@@H](CO)[C@H](O)[C@H]3O)C(=O)C=2C(O)=C1
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
31
Rings
4
Aromatic Rings
3
Rotatable Bonds
4
Van der Waals Molecular Volume
347.99
Topological Polar Surface Area
192.35
Hydrogen Bond Donors
7
Hydrogen Bond Acceptors
11
logP
2.43
Molar Refractivity
105.61
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Created at
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Updated at
9th Jun 2022