Structure Database (LMSD)

Common Name
Rhaponticin
Systematic Name
3',5-Dihydroxy-4'-methoxystilbene 3-O-β-D-glucopyranoside
Synonyms
  • Rhapontin
LM ID
LMPK13090002
Formula
Exact Mass
Calculate m/z
420.142035
Status
Curated

Classification

Biological Context

Rhapontin is a natural stilbenoid glycoside first isolated from rhubarb rhizomes. It is converted by glucosidases to rhapontigenin , a resveratrol analog with antioxidant and anti-cancer activity.1,2,3 Rhapontigenin derived enzymatically from rhapontin has also been found to have antibiotic activity as well as inhibit melanin synthesis.4,5

This information has been provided by Cayman Chemical

References

4. Kim, J.-K., Kim, N., and Lim, Y.-H. Evaluation of the antibacterial activity of rhapontigenin produced from rhapontin by biotransformation against Propionibacterium acnes. J. Microbiol. Biotechnol. 20(1), 82-87 (2010).

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Rheum rhabarbarum (#3621)
Magnoliopsida (#3398)
Rhaponticin from rhubarb rhizomes alleviates liver steatosis and improves blood glucose and lipid profiles in KK/Ay diabetic mice.,
Planta Med, 2009
Pubmed ID: 19235684

String Representations

InChiKey (Click to copy)
GKAJCVFOJGXVIA-DXKBKAGUSA-N
InChi (Click to copy)
InChI=1S/C21H24O9/c1-28-16-5-4-11(8-15(16)24)2-3-12-6-13(23)9-14(7-12)29-21-20(27)19(26)18(25)17(10-22)30-21/h2-9,17-27H,10H2,1H3/b3-2+/t17-,18-,19+,20-,21-/m1/s1
SMILES (Click to copy)
C1=C(O)C=C(/C=C/C2=CC(O)=C(OC)C=C2)C=C1O[C@@H]1O[C@@H]([C@H]([C@@H]([C@H]1O)O)O)CO

Other Databases

Wikipedia
KEGG ID
CHEBI ID
PubChem CID
Cayman ID

Calculated Physicochemical Properties

Heavy Atoms 30
Rings 3
Aromatic Rings 2
Rotatable Bonds 6
Van der Waals Molecular Volume 373.61
Topological Polar Surface Area 151.14
Hydrogen Bond Donors 6
Hydrogen Bond Acceptors 9
logP 2.17
Molar Refractivity 109.14

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Created at
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Updated at
5th Feb 2022