Structure Database (LMSD)
Common Name
Cucurbitacin B
Systematic Name
Synonyms
LM ID
LMST01010104
Formula
Exact Mass
Calculate m/z
558.31927
Sum Composition
Status
Curated
3D model of Cucurbitacin B
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Biological Context
Cucurbitacin B is a plant-derived triterpene that has the classic four-ring structure of mammalian steroids. It has diverse effects on mammalian cells, most notably inducing cell cycle arrest or apoptosis in a range of cancer cell lines.1,2,3 Cucurbitacin B inhibits the growth of several breast cancer cell lines (IC50s = 18-50 nM).4 It suppresses the growth of tumors developed from MDA-MB-231 and 4T-1 breast cancer cells in mice.4 Cucurbitacin B blocks the inflammatory response of macrophages treated with lipopolysaccharide.5 In Drosophila, it serves as an ecdysteroid receptor antagonist (Kd = 5 µM).6
This information has been provided by Cayman Chemical
References
2. Dakeng, S., Duangmano, S., Jiratchariyakul, W., et al. Inhibition of Wnt signaling by cucurbitacin B in breast cancer cells: Reduction of Wnt associated proteins and reduced translocation of falectin-3-mediated ß-catenin to the nucleus. J. Cell. Biochem. 113(1), 49-60 (2012).
3. Dinan, L., Whiting, P., Girault, J.P., et al. Cucurbitacins are insect steroid hormone antagonists acting at the ecdysteroid recepto. Biochem. J. 327( Pt 3)(Pt 3), 643-650 (1997).
4. Gupta, P., and Srivastava, S.K. Inhibition of Integrin-HER2 signaling by Cucurbitacin B leads to in vitro and in vivo breast tumor growth suppression. Oncotarget 5(7), 1812-1828 (2014).
String Representations
InChiKey (Click to copy)
IXQKXEUSCPEQRD-DKRGWESNSA-N
InChi (Click to copy)
InChI=1S/C32H46O8/c1-17(33)40-27(2,3)13-12-23(36)32(9,39)25-21(35)15-29(6)22-11-10-18-19(14-20(34)26(38)28(18,4)5)31(22,8)24(37)16-30(25,29)7/h10,12-13,19-22,25,34-35,39H,11,14-16H2,1-9H3/b13-12+/t19-,20+,21-,22+,25+,29+,30-,31+,32+/m1/s1
SMILES (Click to copy)
[C@@]12(C)C[C@H]([C@]([H])([C@](O)(C)C(=O)/C=C/C(C)(C)OC(=O)C)[C@@]1(C)CC([C@@]1(C)[C@]3([H])C[C@@H](C(=O)C(C)(C)C3=CC[C@@]21[H])O)=O)O
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
40
Rings
4
Aromatic Rings
0
Rotatable Bonds
6
Van der Waals Molecular Volume
567.20
Topological Polar Surface Area
138.20
Hydrogen Bond Donors
3
Hydrogen Bond Acceptors
8
logP
4.64
Molar Refractivity
149.81
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Created at
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Updated at
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