Structure Database (LMSD)

Common Name
Hyodeoxycholic acid
Systematic Name
3α,6α-Dihydroxy-5β-cholan-24-oic Acid
Synonyms
  • HDCA
  • alpha-Hyodeoxycholic Acid
LM ID
LMST04010024
Formula
Exact Mass
Calculate m/z
392.29266
Sum Composition
Status
Curated


Classification

Biological Context

Hyodeoxycholic acid (HDCA) is a secondary bile acid.1 It is produced from lithocholic acid by gut bacteria.1,2,3 Dietary administration of HDCA (1.25% w/w) decreases plasma VLDL and LDL cholesterol levels and reduces fasting glucose levels and atherosclerotic lesion size in LDL receptor knockout mice fed a Western diet.4 Serum levels of HDCA are increased in patients with Crohn’s disease or ulcerative colitis.5

This information has been provided by Cayman Chemical

References

2. Shih, D.M., Shaposhnik, Z., Meng, Y., et al. Hyodeoxycholic acid improves HDL function and inhibits atherosclerotic lesion formation in LDLR-knockout mice. FASEB J. 27(9), 3805-3817 (2013).
5. Einarsson, K. On the formation of hyodeoxycholic acid in the rat. Bile acids and steroids 154. J. Biol. Chem. 241(3), 534-539 (1966).

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Homo sapiens (#9606)
Mammalia (#40674)
Identification of bile acids in the serum and urine in cholestasis. Evidence for 6alpha-hydroxylation of bile acids in man.,
Biochem J, 1976
Pubmed ID: 938463

String Representations

InChiKey (Click to copy)
DGABKXLVXPYZII-SIBKNCMHSA-N
InChi (Click to copy)
InChI=1S/C24H40O4/c1-14(4-7-22(27)28)17-5-6-18-16-13-21(26)20-12-15(25)8-10-24(20,3)19(16)9-11-23(17,18)2/h14-21,25-26H,4-13H2,1-3H3,(H,27,28)/t14-,15-,16+,17-,18+,19+,20+,21+,23-,24-/m1/s1
SMILES (Click to copy)
C1[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@]([H])([C@]([H])(C)CCC(O)=O)CC[C@@]4([H])[C@]3([H])C[C@H](O)[C@]2([H])C[C@H](O)C1

Other Databases

HMDB ID
CHEBI ID
LIPIDBANK ID
BBA0024
PubChem CID
Cayman ID

Calculated Physicochemical Properties

Heavy Atoms 28
Rings 4
Aromatic Rings 0
Rotatable Bonds 4
Van der Waals Molecular Volume 406.84
Topological Polar Surface Area 77.76
Hydrogen Bond Donors 3
Hydrogen Bond Acceptors 4
logP 5.05
Molar Refractivity 109.67

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Created at
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Updated at
1st Mar 2024