Microarray analysis of bone marrow-derived macrophage cells treated with Kdo2-lipid A (KLA) and ATP

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Kdo2-Lipid A / ATP gene array data - treatment:control ratios

KEGG pathway: mRNA surveillance pathway (mmu03015)

Legend:graph_icon: View data/graphs for replicates
Gene symbol    Time course plot Accession Description Treatment 15min 30min 1hr 2hr 4hr 8hr 20hr
2610207I
05Rik
KLA  ATP  ATP+KLA
 NM_001031814 RIKEN cDNA 2610207I05 gene (2610207I05Rik), mRNA [NM_001031814] KLA 1.22 1.22 1.29 1.20 1.30 1.43 1.41
ATP 1.05 1.12 1.00 .98 1.10 1.33 1.31
KLA/ATP 1.31 1.30 1.17 1.08 1.12 1.34 1.69
3222402P
14Rik
KLA  ATP  ATP+KLA
 AK035077 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430084I02 product:SERINE/THREONINE PROTEIN PHOSPHATASE 2A, 72/130 KDA REGULATORY SUBUNIT B (PP2A, SUBUNIT B, B-PR72/PR130) KLA 1.06 .96 1.06 .93 .97 .96 .93
ATP .98 1.04 .93 .98 .95 1.10 .93
KLA/ATP 1.00 1.06 .91 .92 .99 .94 .95
3222402P
14Rik
KLA  ATP  ATP+KLA
 XM_001475836 gb|PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene (3222402P14Rik), mRNA [XM_001475836] KLA 1.38 1.32 1.26 1.05 .84 .83 .85
ATP 1.01 1.02 .93 .94 1.00 1.04 .87
KLA/ATP 1.37 1.47 1.01 .91 .86 .87 .75
5730453I
16Rik
KLA  ATP  ATP+KLA
 NM_172302 RIKEN cDNA 5730453I16 gene (5730453I16Rik), mRNA [NM_172302] KLA 1.06 1.01 .98 .87 .93 1.03 1.02
ATP .96 .98 1.05 1.06 2.10 2.42 1.17
KLA/ATP 1.00 .96 .92 .82 1.81 2.95 1.58
AK077928
KLA  ATP  ATP+KLA
 AK077928 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030447G09 product:unclassifiable, full insert sequence. [AK077928] KLA .94 .91 .95 .95 1.04 .95 .99
ATP 1.11 1.05 .97 .87 .98 .86 .91
KLA/ATP 1.01 1.05 .97 .89 .92 .92 .93
AU014645
KLA  ATP  ATP+KLA
 NM_001033201 expressed sequence AU014645 (AU014645), mRNA [NM_001033201] KLA .81 .90 .86 .75 .67 .74 .85
ATP 1.01 1.02 1.10 1.08 1.40 1.44 .99
KLA/ATP .83 .85 .89 .80 .81 .99 .73
Acin1
KLA  ATP  ATP+KLA
 AK042374 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630085P16 product:unclassifiable, full insert sequence [AK042374] KLA 1.46 1.17 1.31 1.19 1.06 1.11 .89
ATP .94 1.04 1.35 1.47 1.30 1.55 .65
KLA/ATP 1.22 1.35 1.57 1.74 1.42 1.69 .87
Acin1
KLA  ATP  ATP+KLA
 NM_023190 apoptotic chromatin condensation inducer 1 (Acin1), transcript variant 2, mRNA [NM_023190] KLA 1.22 1.30 1.00 1.27 1.23 1.18 1.03
ATP 1.02 1.04 .94 .99 1.19 1.36 1.08
KLA/ATP 1.16 1.39 1.47 1.35 1.58 1.43 1.13
Bat1a
KLA  ATP  ATP+KLA
 NM_019693 HLA-B-associated transcript 1A (Bat1a), mRNA [NM_019693] KLA 1.15 1.21 1.36 1.17 1.39 1.22 1.07
ATP 1.15 1.27 .91 1.33 1.30 1.23 .92
KLA/ATP 1.41 1.41 .90 1.53 1.07 1.15 1.09
Casc3
KLA  ATP  ATP+KLA
 NM_138660 cancer susceptibility candidate 3 (Casc3), mRNA [NM_138660] KLA .90 .91 1.05 1.13 1.53 1.24 1.24
ATP 1.00 1.00 .81 .81 1.32 1.08 1.01
KLA/ATP .97 .96 .89 .85 1.18 1.13 1.28
Clp1
KLA  ATP  ATP+KLA
 NM_133840 CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) (Clp1), mRNA [NM_133840] KLA 1.49 1.62 1.59 1.47 1.53 1.58 1.43
ATP .97 .83 .62 .69 2.38 2.30 1.51
KLA/ATP 1.41 1.45 1.12 1.27 3.42 3.64 2.18
Cpsf1
KLA  ATP  ATP+KLA
 NM_053193 cleavage and polyadenylation specific factor 1 (Cpsf1), mRNA [NM_053193] KLA .89 .88 .86 .82 .85 .60 1.00
ATP 1.10 1.11 .84 1.02 .98 .80 .70
KLA/ATP 1.02 1.00 .87 .89 .56 .58 .55
Cpsf2
KLA  ATP  ATP+KLA
 NM_016856 cleavage and polyadenylation specific factor 2 (Cpsf2), mRNA [NM_016856] KLA 1.72 1.76 1.72 1.71 1.33 1.13 1.18
ATP .99 .99 1.07 .84 .89 1.11 1.08
KLA/ATP 1.63 1.72 1.78 1.40 1.24 1.04 .79
Cpsf3
KLA  ATP  ATP+KLA
 NM_018813 cleavage and polyadenylation specificity factor 3 (Cpsf3), mRNA [NM_018813] KLA .80 .81 .85 .75 .81 .93 .98
ATP 1.04 1.04 1.04 1.03 .81 .45 .79
KLA/ATP .87 .87 .82 .84 .63 .52 .61
Cpsf4
KLA  ATP  ATP+KLA
 NM_178576 cleavage and polyadenylation specific factor 4 (Cpsf4), mRNA [NM_178576] KLA .86 .83 .88 .87 .90 1.22 1.13
ATP .94 .89 .69 .65 .91 1.22 .97
KLA/ATP .82 .78 .72 .66 .84 1.28 1.18
Cpsf6
KLA  ATP  ATP+KLA
 AK077833 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930406E08 product:RIKEN cDNA 4733401N12 gene, full insert sequence [AK077833] KLA .81 .75 .81 .80 .90 .84 .85
ATP 1.08 .96 .99 .87 .84 .43 .47
KLA/ATP .79 .74 .83 .87 .83 .37 .37
Cpsf6
KLA  ATP  ATP+KLA
 NM_001013391 cleavage and polyadenylation specific factor 6 (Cpsf6), mRNA [NM_001013391] KLA 1.07 1.06 1.17 1.17 1.25 1.11 1.26
ATP 1.10 1.17 1.06 1.51 1.40 .99 1.50
KLA/ATP 1.22 1.19 1.28 1.66 1.29 .91 1.33
Cstf1
KLA  ATP  ATP+KLA
 AK078667 in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420451F24 product:CLEAVAGE STIMULATION FACTOR, 50 KDA SUBUNIT (CSTF 50 KDA SUBUNIT) (CF-1 50 KDA SUBUNIT) homolog [Homo sapiens], full insert sequence [AK078667] KLA .79 .75 .74 .76 .77 .83 .76
ATP .87 .92 .85 .87 .94 .76 .66
KLA/ATP .74 .75 .78 .77 1.03 .91 .58
Cstf1
KLA  ATP  ATP+KLA
 NM_024199 cleavage stimulation factor, 3 pre-RNA, subunit 1 (Cstf1), mRNA [NM_024199] KLA .67 .63 .62 .83 .78 .91 1.10
ATP 1.02 .93 .93 .77 1.00 1.61 1.43
KLA/ATP .68 .63 .73 .59 .75 1.46 1.50
Cstf2
KLA  ATP  ATP+KLA
 NM_133196 cleavage stimulation factor, 3 pre-RNA subunit 2 (Cstf2), mRNA [NM_133196] KLA 2.19 2.14 2.10 1.90 1.53 .70 .77
ATP 1.09 1.23 1.14 1.23 .94 .68 .89
KLA/ATP 2.12 2.21 1.90 2.11 1.36 .69 .80
Cstf2t
KLA  ATP  ATP+KLA
 NM_031249 cleavage stimulation factor, 3 pre-RNA subunit 2, tau (Cstf2t), mRNA [NM_031249] KLA 1.12 1.09 1.02 .95 .85 .90 .82
ATP .98 .91 .97 .60 .51 1.00 .95
KLA/ATP 1.03 1.03 1.09 .68 .63 .97 .91
Cstf3
KLA  ATP  ATP+KLA
 NM_001037326 cleavage stimulation factor, 3 pre-RNA, subunit 3 (Cstf3), transcript variant 3, mRNA [NM_001037326] KLA 1.18 1.11 .95 1.15 .96 .98 1.06
ATP .76 .59 .81 .77 .82 .90 .64
KLA/ATP .97 .92 1.05 .96 .94 .79 .76
Cstf3
KLA  ATP  ATP+KLA
 NM_145529 cleavage stimulation factor, 3 pre-RNA, subunit 3 (Cstf3), transcript variant 1, mRNA [NM_145529] KLA 1.20 1.14 1.06 .99 1.27 1.43 .85
ATP .90 .94 1.08 1.04 1.57 1.78 1.30
KLA/ATP 1.06 1.15 1.19 .91 1.62 1.93 1.56
Dazap1
KLA  ATP  ATP+KLA
 NM_133188 DAZ associated protein 1 (Dazap1), transcript variant 1, mRNA [NM_133188] KLA 1.06 1.08 1.07 .95 1.04 1.23 1.21
ATP 1.02 1.20 1.02 1.26 1.11 1.15 2.00
KLA/ATP 1.13 1.18 .95 1.25 .99 1.12 2.11
Eif4a3
KLA  ATP  ATP+KLA
 NM_138669 eukaryotic translation initiation factor 4A, isoform 3 (Eif4a3), mRNA [NM_138669] KLA 1.10 1.12 1.03 1.04 .91 .85 .82
ATP .97 1.05 1.00 1.32 1.02 .89 .72
KLA/ATP 1.07 1.13 1.10 1.37 1.06 .87 .52
Etf1
KLA  ATP  ATP+KLA
 AK038771 adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230061J20 product:unclassifiable, full insert sequence. [AK038771] KLA 1.07 1.04 1.13 1.02 1.18 1.05 1.19
ATP 1.42 1.52 2.25 1.58 1.52 1.12 1.19
KLA/ATP 1.21 1.30 1.84 1.19 1.29 1.16 1.09
Etf1
KLA  ATP  ATP+KLA
 NM_144866 eukaryotic translation termination factor 1 (Etf1), mRNA [NM_144866] KLA 1.60 1.56 1.54 1.53 1.58 1.48 1.49
ATP 1.06 1.03 1.18 1.36 2.00 1.72 1.24
KLA/ATP 1.62 1.48 1.40 1.54 1.88 1.80 1.43
Fip1l1
KLA  ATP  ATP+KLA
 NM_024183 FIP1 like 1 (S. cerevisiae) (Fip1l1), mRNA [NM_024183] KLA 1.17 1.12 1.11 1.09 1.01 1.04 1.12
ATP 1.04 .99 .95 .92 .92 .97 .86
KLA/ATP 1.12 1.10 1.03 1.01 .94 1.00 .93
Gspt1
KLA  ATP  ATP+KLA
 BC029786 G1 to S phase transition 1, mRNA (cDNA clone IMAGE:4950993), with apparent retained intron [BC029786] KLA 1.33 1.27 1.18 .97 .67 .51 .58
ATP .88 .75 .83 .65 .59 .44 .32
KLA/ATP 1.19 1.15 1.10 .67 .64 .38 .19
Gspt1
KLA  ATP  ATP+KLA
 NM_146066 G1 to S phase transition 1 (Gspt1), mRNA [NM_146066] KLA 1.88 1.94 1.85 1.44 1.36 .94 1.65
ATP 1.00 1.11 .82 1.02 .96 .98 .86
KLA/ATP 1.98 1.97 1.11 1.58 .93 .68 .75
Gspt2
KLA  ATP  ATP+KLA
 NM_008179 G1 to S phase transition 2 (Gspt2), mRNA [NM_008179] KLA .51 .51 .45 .47 .42 .39 .40
ATP 1.00 .98 .74 .48 .40 .48 .42
KLA/ATP .53 .46 .44 .46 .42 .42 .31
Hbs1l
KLA  ATP  ATP+KLA
 NM_019702 Hbs1-like (S. cerevisiae) (Hbs1l), transcript variant 1, mRNA [NM_019702] KLA 1.22 1.17 1.11 1.16 1.10 1.04 1.07
ATP .93 .94 1.03 .92 1.21 1.46 .91
KLA/ATP 1.09 1.12 1.21 1.00 1.19 1.30 .99
Magoh
KLA  ATP  ATP+KLA
 NM_010760 mago-nashi homolog, proliferation-associated (Drosophila) (Magoh), mRNA [NM_010760] KLA 1.12 1.03 .95 1.10 .90 .96 1.00
ATP .87 .84 1.20 1.06 1.10 1.41 .87
KLA/ATP .93 1.08 1.38 1.10 1.28 1.26 .80
Magohb
KLA  ATP  ATP+KLA
 NM_025564 mago-nashi homolog B (Drosophila) (Magohb), mRNA [NM_025564] KLA 5.18 5.54 4.96 6.10 2.81 2.36 2.86
ATP 1.05 .91 1.21 1.09 .98 1.82 .74
KLA/ATP 5.19 5.26 7.78 5.60 1.78 2.08 1.38
Mm.33624
4
KLA  ATP  ATP+KLA
 158508452 Unknown KLA 1.01 1.08 .97 .96 1.00 .96 .92
ATP .95 .99 .98 .99 .97 1.01 1.03
KLA/ATP .95 .96 1.08 .97 .97 .96 .97
Mm.42730
7
KLA  ATP  ATP+KLA
 109809755 Unknown KLA 1.07 1.13 .97 1.03 1.01 .96 1.09
ATP 1.01 1.02 .92 .94 .72 .73 .87
KLA/ATP 1.08 1.13 .93 .89 .85 .79 .70
Mm.44858
KLA  ATP  ATP+KLA
 124249088 Unknown KLA 1.18 1.32 1.26 1.32 1.35 1.26 1.14
ATP .92 .95 .98 1.09 1.22 1.31 .94
KLA/ATP 1.19 1.30 1.37 1.41 1.47 1.45 1.05
Mm.46770
6
KLA  ATP  ATP+KLA
 58331155 Unknown KLA .50 .44 .43 .44 .38 .32 .29
ATP .82 .76 .83 .42 .37 .55 .34
KLA/ATP .41 .40 .47 .40 .42 .35 .23
Mm.47445
5
KLA  ATP  ATP+KLA
 149260531 Unknown KLA .99 .93 .95 .92 .97 .92 .95
ATP .99 1.13 1.08 1.23 1.05 .94 .86
KLA/ATP 1.02 .95 .89 1.15 1.02 .94 .83
Msi1
KLA  ATP  ATP+KLA
 AK084019 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130076N11 product:Musashi homolog 1(Drosophila), full insert sequence [AK084019] KLA 1.01 1.03 1.02 1.00 1.03 1.00 .99
ATP 1.01 .99 .99 .96 .98 .94 .91
KLA/ATP 1.00 1.09 .96 1.04 .95 .98 .95
Msi1
KLA  ATP  ATP+KLA
 NM_008629 Musashi homolog 1(Drosophila) (Msi1), mRNA [NM_008629] KLA 1.20 1.18 1.14 1.27 1.23 1.19 1.08
ATP 1.02 1.02 1.19 1.31 1.43 1.20 1.08
KLA/ATP 1.21 1.24 1.53 1.43 1.53 1.32 1.32
Msi2
KLA  ATP  ATP+KLA
 NM_054043 Musashi homolog 2 (Drosophila) (Msi2), mRNA [NM_054043] KLA 1.44 1.54 1.99 2.71 2.39 1.63 1.29
ATP .97 .97 1.15 1.10 .94 .90 1.42
KLA/ATP 1.40 1.59 1.96 1.85 1.57 1.70 3.70
Ncbp2
KLA  ATP  ATP+KLA
 NM_026554 nuclear cap binding protein subunit 2 (Ncbp2), mRNA [NM_026554] KLA .77 .78 .81 .78 .75 .81 1.04
ATP .93 .93 1.01 1.00 .72 .57 1.15
KLA/ATP .78 .82 .91 .85 .71 .49 .63
Nudt21
KLA  ATP  ATP+KLA
 AK017799 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730530J16 product:inferred: RIKEN cDNA 5730530J16 gene, full insert sequence [AK017799] KLA .51 .50 .42 .41 .44 .42 .41
ATP .89 .90 .85 .71 1.06 .86 .25
KLA/ATP .46 .49 .48 .47 1.06 .73 .18
Nudt21
KLA  ATP  ATP+KLA
 NM_026623 nudix (nucleoside diphosphate linked moiety X)-type motif 21 (Nudt21), mRNA [NM_026623] KLA 1.12 1.05 1.09 1.00 .93 .88 .96
ATP 1.06 1.08 1.16 1.15 .91 1.00 .69
KLA/ATP 1.09 1.12 1.05 1.06 .80 .79 .59
Nxf1
KLA  ATP  ATP+KLA
 NM_016813 nuclear RNA export factor 1 homolog (S. cerevisiae) (Nxf1), mRNA [NM_016813] KLA 2.56 2.72 2.83 1.97 1.27 1.06 1.10
ATP 1.00 1.13 1.32 2.04 1.64 1.48 1.15
KLA/ATP 2.81 2.91 2.72 4.35 2.42 1.54 1.32
Nxf2
KLA  ATP  ATP+KLA
 NM_031259 nuclear RNA export factor 2 (Nxf2), mRNA [NM_031259] KLA .95 .97 .90 1.00 .91 .90 1.04
ATP 1.04 1.07 .99 1.02 .87 .89 .95
KLA/ATP .94 .89 .88 .95 .85 .90 .85
Nxf3
KLA  ATP  ATP+KLA
 NM_001024141 nuclear RNA export factor 3 (Nxf3), mRNA [NM_001024141] KLA .95 1.03 1.02 1.04 .95 .96 .98
ATP 1.09 .96 1.01 1.01 .95 .96 1.05
KLA/ATP 1.05 1.07 1.08 1.07 .95 1.00 .94
Nxf7
KLA  ATP  ATP+KLA
 NM_130888 nuclear RNA export factor 7 (Nxf7), mRNA [NM_130888] KLA 1.06 .97 .99 1.02 .98 .96 .94
ATP 1.01 1.06 1.04 .95 .99 1.01 .99
KLA/ATP .95 1.01 .97 .95 .94 .93 1.10
Nxt1
KLA  ATP  ATP+KLA
 NM_019761 NTF2-related export protein 1 (Nxt1), transcript variant 2, mRNA [NM_019761] KLA .46 .46 .49 .50 .63 .91 .90
ATP .93 .95 1.08 .96 1.61 3.34 1.02
KLA/ATP .44 .47 .59 .54 1.18 2.80 1.16
Nxt2
KLA  ATP  ATP+KLA
 NM_172782 nuclear transport factor 2-like export factor 2 (Nxt2), mRNA [NM_172782] KLA 1.07 1.12 1.13 1.01 .98 .94 1.01
ATP .98 1.26 1.17 1.44 1.13 .99 .61
KLA/ATP 1.08 1.22 .98 1.32 .97 1.07 .80
Pabpc1
KLA  ATP  ATP+KLA
 AK005009 adult male liver cDNA, RIKEN full-length enriched library, clone:1300015A08 product:poly A binding protein, cytoplasmic 1, full insert sequence [AK005009] KLA 1.13 1.21 1.13 1.02 1.40 1.23 1.50
ATP 1.75 1.90 2.87 2.53 3.50 1.80 1.06
KLA/ATP 1.88 2.43 3.09 2.31 2.25 1.68 1.47
Pabpc1
KLA  ATP  ATP+KLA
 NM_008774 poly A binding protein, cytoplasmic 1 (Pabpc1), mRNA [NM_008774] KLA 1.28 1.27 1.07 1.22 1.13 .99 .92
ATP .99 .91 1.04 .85 1.11 .95 .57
KLA/ATP 1.27 1.10 1.34 1.16 1.13 .82 .78
Pabpc2
KLA  ATP  ATP+KLA
 NM_011033 poly A binding protein, cytoplasmic 2 (Pabpc2), mRNA [NM_011033] KLA 1.24 1.21 1.22 1.20 1.14 .98 .99
ATP 1.00 .98 1.12 1.13 1.24 1.07 .80
KLA/ATP 1.21 1.20 1.37 1.42 1.35 1.17 .96
Pabpc3
KLA  ATP  ATP+KLA
 AK016578 adult male testis cDNA, RIKEN full-length enriched library, clone:4932702K14 product:POLY A BINDING PROTEIN, CYTOPLASMIC 1 homolog [Mus musculus], full insert sequence [AK016578] KLA .99 1.01 .98 1.03 1.04 1.00 .95
ATP .98 1.05 1.00 .98 .98 .99 1.04
KLA/ATP .99 .98 1.01 .96 .94 1.02 1.05
Pabpc4
KLA  ATP  ATP+KLA
 NM_148917 poly A binding protein, cytoplasmic 4 (Pabpc4), transcript variant 2, mRNA [NM_148917] KLA .99 1.01 .91 .75 .56 .45 .55
ATP .99 1.11 1.00 1.32 1.41 1.20 .50
KLA/ATP 1.00 1.03 .80 .96 .84 .74 .49
Pabpc4l
KLA  ATP  ATP+KLA
 NM_001101479 poly(A) binding protein, cytoplasmic 4-like (Pabpc4l), mRNA [NM_001101479] KLA 1.00 1.01 1.02 1.02 .96 .96 .95
ATP 1.03 .95 1.84 1.06 .93 .99 .99
KLA/ATP 1.03 1.00 1.07 1.05 1.00 .93 1.02
Pabpc5
KLA  ATP  ATP+KLA
 NM_053114 poly A binding protein, cytoplasmic 5 (Pabpc5), mRNA [NM_053114] KLA 1.00 1.02 1.03 .99 .95 .96 .97
ATP .95 1.05 .99 .97 1.00 1.03 1.01
KLA/ATP .99 .96 1.00 1.04 .95 .98 1.02
Pabpn1
KLA  ATP  ATP+KLA
 AK137240 adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530063N22 product:poly(A) binding protein, nuclear 1, full insert sequence. [AK137240] KLA 1.06 1.14 .99 1.19 1.06 1.19 1.07
ATP .95 1.12 1.07 1.45 1.20 1.12 .82
KLA/ATP 1.04 1.45 1.28 1.36 1.31 .88 .95
Pabpn1
KLA  ATP  ATP+KLA
 AK157143 activated spleen cDNA, RIKEN full-length enriched library, clone:F830204I09 product:poly(A) binding protein, nuclear 1, full insert sequence [AK157143] KLA .57 .53 .57 .69 .91 .72 .98
ATP .75 .61 .29 .46 1.31 .90 .76
KLA/ATP .44 .39 .29 .50 1.02 .69 .86
Pabpn1
KLA  ATP  ATP+KLA
 NM_019402 poly(A) binding protein, nuclear 1 (Pabpn1), mRNA [NM_019402] KLA .82 .86 .71 .73 .93 .89 1.24
ATP 1.17 1.33 .95 1.41 1.03 .82 1.35
KLA/ATP .88 1.01 .68 1.03 .78 .49 1.21
Papola
KLA  ATP  ATP+KLA
 NM_011112 poly (A) polymerase alpha (Papola), mRNA [NM_011112] KLA .93 1.10 .97 1.01 1.02 1.14 1.26
ATP .85 1.06 1.01 1.13 .89 1.22 1.58
KLA/ATP .90 1.08 .90 1.14 .82 1.00 1.70
Papolb
KLA  ATP  ATP+KLA
 NM_019943 poly (A) polymerase beta (testis specific) (Papolb), mRNA [NM_019943] KLA .94 1.05 1.07 1.04 .97 .99 .94
ATP 1.04 .96 .95 .97 1.03 .97 1.01
KLA/ATP 1.02 1.08 .99 .94 1.00 .97 1.01
Papolg
KLA  ATP  ATP+KLA
 NM_172555 poly(A) polymerase gamma (Papolg), mRNA [NM_172555] KLA 1.61 1.65 1.37 1.33 1.04 1.17 1.07
ATP .95 .90 .94 .49 .61 1.22 1.13
KLA/ATP 1.55 1.60 1.27 .66 .60 1.03 1.30
Pcf11
KLA  ATP  ATP+KLA
 BC048838 cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:4948470), complete cds. [BC048838] KLA 1.47 1.30 1.19 1.25 1.40 1.18 1.04
ATP .69 .62 .48 .48 1.02 1.54 1.16
KLA/ATP .74 .74 .67 .67 .75 1.35 1.77
Pcf11
KLA  ATP  ATP+KLA
 NM_029078 cleavage and polyadenylation factor subunit homolog (S. cerevisiae) (Pcf11), mRNA [NM_029078] KLA 1.67 1.81 1.89 1.62 1.86 1.53 1.32
ATP 1.04 1.27 1.81 5.84 6.97 2.72 .87
KLA/ATP 1.70 1.77 2.52 5.98 7.24 3.56 2.11
Pelo
KLA  ATP  ATP+KLA
 NM_134058 pelota homolog (Drosophila) (Pelo), mRNA [NM_134058] KLA .63 .65 .59 .59 .59 .75 .87
ATP .88 .81 1.04 1.73 3.14 2.02 1.36
KLA/ATP .59 .57 .66 .91 1.87 1.40 .83
Pnn
KLA  ATP  ATP+KLA
 NM_008891 pinin (Pnn), mRNA [NM_008891] KLA .63 .63 .67 .69 .92 1.06 1.11
ATP .76 .74 .62 .57 .72 1.10 .80
KLA/ATP .51 .48 .44 .43 .64 .98 .91
Ppp1ca
KLA  ATP  ATP+KLA
 NM_031868 protein phosphatase 1, catalytic subunit, alpha isoform (Ppp1ca), mRNA [NM_031868] KLA .89 .93 .93 .86 .95 1.07 1.20
ATP 1.04 1.07 .93 1.02 1.01 .89 1.10
KLA/ATP .98 .93 .74 .91 .84 1.01 1.34
Ppp1cb
KLA  ATP  ATP+KLA
 NM_172707 protein phosphatase 1, catalytic subunit, beta isoform (Ppp1cb), mRNA [NM_172707] KLA 1.12 1.08 1.05 1.02 .89 .84 .94
ATP .89 .87 .75 .55 .73 1.14 .69
KLA/ATP .92 .94 .80 .64 .64 .83 .65
Ppp1cc
KLA  ATP  ATP+KLA
 NM_013636 protein phosphatase 1, catalytic subunit, gamma isoform (Ppp1cc), mRNA [NM_013636] KLA .51 .51 .49 .48 .53 .64 .64
ATP 1.02 1.01 .85 .79 .72 .89 .95
KLA/ATP .54 .49 .42 .43 .56 .76 .81
Ppp2ca
KLA  ATP  ATP+KLA
 NM_019411 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform (Ppp2ca), mRNA [NM_019411] KLA 1.17 1.13 1.18 1.20 1.54 1.45 1.34
ATP 1.09 1.20 1.07 1.33 1.56 2.04 1.43
KLA/ATP 1.14 1.17 1.15 1.49 1.59 2.37 2.02
Ppp2cb
KLA  ATP  ATP+KLA
 NM_017374 protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform (Ppp2cb), mRNA [NM_017374] KLA 1.32 1.33 1.37 1.24 1.27 1.09 1.18
ATP .94 .93 .82 .91 1.22 2.01 1.08
KLA/ATP 1.24 1.14 .80 .97 1.13 1.54 1.18
Ppp2r1a
KLA  ATP  ATP+KLA
 NM_016891 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform (Ppp2r1a), mRNA [NM_016891] KLA 1.44 1.39 1.47 1.37 1.69 1.33 1.16
ATP 1.18 1.55 .85 1.67 1.38 .99 1.24
KLA/ATP 1.66 1.98 .97 2.33 1.41 1.65 1.38
Ppp2r1b
KLA  ATP  ATP+KLA
 NM_001034085 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform (Ppp2r1b), transcript variant 1, mRNA [NM_001034085] KLA 1.26 1.17 1.14 1.13 1.12 1.11 .99
ATP .90 .90 .96 .98 1.59 1.71 1.16
KLA/ATP 1.23 1.16 .99 1.00 1.54 1.34 1.24
Ppp2r1b
KLA  ATP  ATP+KLA
 NM_028614 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform (Ppp2r1b), transcript variant 2, mRNA [NM_028614] KLA 2.38 2.38 2.53 1.80 1.52 .95 1.16
ATP 1.17 1.29 1.04 1.09 1.16 1.19 1.00
KLA/ATP 2.59 2.78 1.82 2.31 1.34 1.03 .75
Ppp2r2a
KLA  ATP  ATP+KLA
 NM_028032 protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform (Ppp2r2a), mRNA [NM_028032] KLA 2.18 2.42 2.58 2.17 2.08 1.83 1.57
ATP 1.06 1.12 .90 1.28 1.76 1.70 1.39
KLA/ATP 2.55 2.38 1.62 2.68 2.25 2.55 1.86
Ppp2r2b
KLA  ATP  ATP+KLA
 AK086561 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930037C08 product:unclassifiable, full insert sequence [AK086561] KLA .94 1.02 1.07 1.02 1.02 .97 .98
ATP 1.01 1.04 1.01 .99 .97 .95 1.00
KLA/ATP 1.04 1.06 1.01 .96 1.02 .90 .93
Ppp2r2b
KLA  ATP  ATP+KLA
 NM_028392 protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform (Ppp2r2b), transcript variant 2, mRNA [NM_028392] KLA 1.01 1.02 .96 1.00 1.04 1.01 1.00
ATP 1.00 .96 1.07 .93 .95 1.01 1.03
KLA/ATP .95 1.01 1.06 1.07 .98 1.02 1.03
Ppp2r2c
KLA  ATP  ATP+KLA
 NM_172994 protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform (Ppp2r2c), mRNA [NM_172994] KLA .97 .98 .96 1.02 1.02 1.06 1.01
ATP .96 1.05 1.03 .98 1.01 1.04 1.06
KLA/ATP .98 .98 1.00 .96 1.00 .86 1.10
Ppp2r2d
KLA  ATP  ATP+KLA
 NM_026391 protein phosphatase 2, regulatory subunit B, delta isoform (Ppp2r2d), mRNA [NM_026391] KLA 1.07 1.03 1.14 1.18 1.16 1.27 1.13
ATP .96 .93 .95 .76 1.34 2.21 1.22
KLA/ATP 1.01 1.01 1.01 .87 1.91 2.19 2.18
Ppp2r3a
KLA  ATP  ATP+KLA
 AK143212 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130310B05 product:protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha, full insert sequence [AK143212] KLA 1.04 1.01 .92 1.16 1.08 1.09 1.04
ATP .98 .89 1.20 1.15 1.05 1.61 .79
KLA/ATP .95 .91 1.23 1.20 1.51 1.74 1.03
Ppp2r3c
KLA  ATP  ATP+KLA
 NM_021529 protein phosphatase 2, regulatory subunit B, gamma (Ppp2r3c), mRNA [NM_021529] KLA 1.19 1.21 1.28 1.45 1.35 1.38 1.59
ATP 1.02 .93 1.14 .95 .98 1.12 1.39
KLA/ATP 1.23 1.23 1.48 1.08 1.14 1.12 2.02
Ppp2r5a
KLA  ATP  ATP+KLA
 NM_144880 protein phosphatase 2, regulatory subunit B (B56), alpha isoform (Ppp2r5a), mRNA [NM_144880] KLA 3.55 3.70 4.28 3.81 3.87 2.52 1.55
ATP .99 1.00 .80 .82 1.04 1.62 1.41
KLA/ATP 3.48 3.79 2.82 2.77 2.16 2.02 2.43
Ppp2r5b
KLA  ATP  ATP+KLA
 NM_198168 protein phosphatase 2, regulatory subunit B (B56), beta isoform (Ppp2r5b), mRNA [NM_198168] KLA 1.12 1.20 1.13 1.18 1.13 .98 1.12
ATP .95 .98 .92 .98 .84 1.03 1.48
KLA/ATP 1.16 1.13 .88 .91 1.00 1.00 1.38
Ppp2r5c
KLA  ATP  ATP+KLA
 NM_012023 protein phosphatase 2, regulatory subunit B (B56), gamma isoform (Ppp2r5c), transcript variant 1, mRNA [NM_012023] KLA .80 .82 .82 .78 .88 1.07 1.27
ATP 1.07 1.11 1.09 1.14 .89 .64 1.07
KLA/ATP .87 .84 .77 .82 .73 .76 1.09
Ppp2r5d
KLA  ATP  ATP+KLA
 NM_009358 protein phosphatase 2, regulatory subunit B (B56), delta isoform (Ppp2r5d), mRNA [NM_009358] KLA .87 .86 .80 .75 .74 .77 .69
ATP .97 .96 1.05 1.10 1.00 .88 .62
KLA/ATP .91 .89 .84 .77 .79 .69 .59
Ppp2r5e
KLA  ATP  ATP+KLA
 NM_012024 protein phosphatase 2, regulatory subunit B (B56), epsilon isoform (Ppp2r5e), mRNA [NM_012024] KLA 1.07 1.09 1.12 1.14 1.11 1.11 1.15
ATP .99 .85 .92 .74 .76 1.23 1.30
KLA/ATP .99 .98 1.05 .77 .87 1.22 1.64
Rbm8a
KLA  ATP  ATP+KLA
 NM_025875 RNA binding motif protein 8a (Rbm8a), transcript variant 2, mRNA [NM_025875] KLA 1.11 1.17 1.05 1.17 1.09 1.08 1.01
ATP 1.00 1.07 1.04 1.17 1.00 1.04 .83
KLA/ATP 1.05 1.13 1.24 1.21 1.18 1.10 .91
Refbp2
KLA  ATP  ATP+KLA
 NM_019484 RNA and export factor binding protein 2 (Refbp2), mRNA [NM_019484] KLA 1.09 1.18 1.13 1.20 1.12 1.09 .84
ATP 1.02 1.07 1.07 1.66 1.44 1.03 .68
KLA/ATP 1.12 1.25 1.19 1.74 1.49 .94 .62
Rngtt
KLA  ATP  ATP+KLA
 NM_011884 RNA guanylyltransferase and 5-phosphatase (Rngtt), mRNA [NM_011884] KLA 1.19 1.16 1.29 1.18 .88 .84 1.14
ATP 1.15 1.12 1.14 .95 .85 1.09 1.10
KLA/ATP 1.33 1.35 1.28 1.02 .82 1.08 1.11
Rnmt
KLA  ATP  ATP+KLA
 AK129130 mRNA for mKIAA0398 protein [AK129130] KLA .66 .69 .62 .68 .77 .80 .90
ATP 1.19 1.24 1.25 .88 .83 .58 .47
KLA/ATP .75 .82 1.30 .67 .87 .72 .40
Rnmt
KLA  ATP  ATP+KLA
 NM_026440 RNA (guanine-7-) methyltransferase (Rnmt), mRNA [NM_026440] KLA 1.05 1.05 1.04 1.09 1.17 1.06 1.32
ATP 1.08 1.02 .94 .82 .94 1.42 1.05
KLA/ATP 1.08 1.03 .95 .78 .85 1.17 .94
Rnps1
KLA  ATP  ATP+KLA
 NM_009070 ribonucleic acid binding protein S1 (Rnps1), transcript variant 1, mRNA [NM_009070] KLA 1.05 1.02 .93 1.04 .98 1.08 1.05
ATP .89 .92 .95 1.10 1.28 1.32 .85
KLA/ATP .95 1.01 .96 1.22 1.18 1.17 .74
Sap18
KLA  ATP  ATP+KLA
 NM_009119 Sin3-associated polypeptide 18 (Sap18), mRNA [NM_009119] KLA .92 .88 .82 .92 .82 .79 .93
ATP 1.01 1.04 2.82 4.93 2.66 2.06 .87
KLA/ATP .89 .96 2.85 4.52 3.34 2.21 .97
Smg5
KLA  ATP  ATP+KLA
 BC100408 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans), mRNA (cDNA clone MGC:118167 IMAGE:30734268), complete cds. [BC100408] KLA 1.00 1.07 1.03 .91 1.24 1.07 1.34
ATP 1.09 1.16 .95 .83 1.29 1.11 1.03
KLA/ATP 1.11 1.10 .89 .82 1.15 .92 .94
Smg5
KLA  ATP  ATP+KLA
 NM_178246 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg5), mRNA [NM_178246] KLA 1.00 1.09 1.09 1.12 1.41 1.68 2.09
ATP 1.05 1.07 .86 .76 1.21 1.44 1.45
KLA/ATP 1.18 1.11 .75 .75 1.14 1.42 1.54
Smg6
KLA  ATP  ATP+KLA
 NM_001002764 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg6), mRNA [NM_001002764] KLA .70 .76 .70 .68 .74 .84 .95
ATP .93 1.04 1.12 1.23 .82 1.15 1.06
KLA/ATP .71 .79 .80 .80 .83 1.05 1.06
Smg7
KLA  ATP  ATP+KLA
 NM_001005507 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg7), mRNA [NM_001005507] KLA 2.55 2.61 3.06 2.93 2.65 2.66 1.97
ATP .99 1.03 1.17 1.22 1.40 2.80 2.45
KLA/ATP 2.59 2.92 3.39 3.26 3.27 3.96 3.89
Srrm1
KLA  ATP  ATP+KLA
 NM_016799 serine/arginine repetitive matrix 1 (Srrm1), mRNA [NM_016799] KLA 1.10 .94 .98 1.04 1.21 1.29 1.13
ATP 1.03 .81 .96 .88 1.47 1.24 1.10
KLA/ATP 1.27 .93 .90 1.10 1.43 1.25 1.30
Ssu72
KLA  ATP  ATP+KLA
 AK005220 adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500011L16 product:hypothetical Ssu72-like protein containing protein, full insert sequence. [AK005220] KLA 1.11 .94 1.06 1.13 1.24 1.53 1.28
ATP 1.14 1.03 1.29 1.11 1.18 .85 .83
KLA/ATP 1.06 1.04 1.35 1.24 1.62 1.16 1.04
Ssu72
KLA  ATP  ATP+KLA
 NM_026899 Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), mRNA [NM_026899] KLA 1.12 1.13 1.18 1.18 1.33 1.56 1.48
ATP 1.00 1.03 1.09 1.27 1.11 .83 .98
KLA/ATP 1.12 1.17 1.26 1.34 1.35 1.22 1.23
Thoc4
KLA  ATP  ATP+KLA
 NM_011568 THO complex 4 (Thoc4), mRNA [NM_011568] KLA .99 .96 .87 .99 .71 .60 .60
ATP .97 .92 1.37 1.52 1.35 1.09 .45
KLA/ATP .92 .98 1.09 1.27 1.31 .85 .29
Upf1
KLA  ATP  ATP+KLA
 NM_030680 UPF1 regulator of nonsense transcripts homolog (yeast) (Upf1), transcript variant 2, mRNA [NM_030680] KLA 1.04 .97 1.12 1.07 1.34 1.55 1.44
ATP 1.15 1.21 .88 .95 1.05 1.43 1.32
KLA/ATP 1.17 1.20 .92 1.10 1.05 1.33 1.73
Upf2
KLA  ATP  ATP+KLA
 AK045943 adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230325K09 product:HYPOTHETICAL 69.8 KDA PROTEIN homolog [Macaca fascicularis], full insert sequence. [AK045943] KLA .95 .97 .96 .91 1.05 1.04 1.06
ATP .96 .92 .92 .94 1.05 1.06 .99
KLA/ATP .88 .93 .90 .91 1.03 .97 1.01
Upf2
KLA  ATP  ATP+KLA
 NM_001081132 UPF2 regulator of nonsense transcripts homolog (yeast) (Upf2), mRNA [NM_001081132] KLA 1.07 1.10 1.08 1.18 1.13 1.36 1.30
ATP .99 1.03 1.11 .85 .96 1.19 1.28
KLA/ATP 1.05 1.18 1.25 .98 1.19 1.41 1.67
Upf3a
KLA  ATP  ATP+KLA
 AK145471 blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0002C10 product:UPF3 regulator of nonsense transcripts homolog A (yeast), full insert sequence [AK145471] KLA 1.03 1.11 1.02 1.12 1.04 1.06 .96
ATP .92 .87 1.02 .93 1.04 1.34 .85
KLA/ATP .97 1.05 1.20 1.05 1.27 1.33 .91
Upf3b
KLA  ATP  ATP+KLA
 NM_026573 UPF3 regulator of nonsense transcripts homolog B (yeast) (Upf3b), mRNA [NM_026573] KLA .67 .65 .58 .66 .65 .91 .89
ATP .99 1.11 1.64 1.34 .93 .96 1.02
KLA/ATP .62 .75 .99 .81 .83 .76 .79
Wdr33
KLA  ATP  ATP+KLA
 BC064745 WD repeat domain 33, mRNA (cDNA clone IMAGE:30093795), complete cds. [BC064745] KLA 1.26 1.21 1.17 1.10 1.00 .99 1.26
ATP 1.00 .97 1.28 1.33 1.06 1.08 1.41
KLA/ATP 1.35 1.28 1.34 1.35 .93 .97 1.21
Wdr33
KLA  ATP  ATP+KLA
 NM_028866 WD repeat domain 33 (Wdr33), mRNA [NM_028866] KLA 1.34 1.29 1.27 1.25 1.27 1.22 1.20
ATP 1.03 1.08 1.11 1.09 1.25 1.33 1.24
KLA/ATP 1.37 1.29 1.29 1.18 1.17 1.55 1.65
Wdr82
KLA  ATP  ATP+KLA
 NM_029896 WD repeat domain containing 82 (Wdr82), mRNA [NM_029896] KLA 1.06 1.03 1.06 1.14 1.07 1.15 1.06
ATP .94 .99 .95 .82 .96 1.24 1.03
KLA/ATP 1.01 1.07 .93 .86 1.01 1.31 1.18
Wibg
KLA  ATP  ATP+KLA
 NM_030100 within bgcn homolog (Drosophila) (Wibg), mRNA [NM_030100] KLA 3.31 3.96 3.61 2.82 1.91 1.53 1.21
ATP 1.05 1.30 1.07 1.52 1.46 1.96 .83
KLA/ATP 4.18 4.63 3.16 4.61 2.46 2.21 1.75