In-Silico Structure Database (LMISSD)

Systematic Name
GalNAcα1-3(Fucα1-2)Galβ1-3GalNAcα1-3(Fucα1-2)Galβ1-4GlcNAcβ1-3Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/20:0)
LM ID
LMSP0505AY03
Status
Active (generated by computational methods)
Exact Mass
Calculate m/z
2508.272135
Formula

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MDLMOL SDF CSV TSV PNG
MDLMOL files can be opened in various drawing programs. In ChemDraw, open as filetype "MDL Molfile".

Main

Classification

Category
Main Class
Sub Class
Sphingolipids [SP]
Neutral glycosphingolipids [SP05]
Galbeta1-4GlcNAcbeta1-3Galbeta1-4Glc- (Neolacto series) [SP0505]

String Representations

InChiKey (Click to copy)
JJXDVRVSRVRJNV-BNDIYOHKSA-N
InChi (Click to copy)
InChI=1S/C112H197N5O56/c1-9-11-13-15-17-19-21-23-24-25-26-28-30-32-34-36-38-40-68(132)117-57(58(131)39-37-35-33-31-29-27-22-20-18-16-14-12-10-2)50-152-106-89(149)86(146)94(67(49-126)163-106)165-110-91(151)97(78(138)62(44-121)158-110)169-103-70(114-54(6)128)82(142)92(65(47-124)161-103)164-109-90(150)96(77(137)61(43-120)157-109)168-104-71(115-55(7)129)83(143)93(66(48-125)162-104)166-111-100(172-107-87(147)84(144)73(133)51(3)153-107)99(80(140)63(45-122)159-111)171-105-72(116-56(8)130)95(76(136)60(42-119)156-105)167-112-101(173-108-88(148)85(145)74(134)52(4)154-108)98(79(139)64(46-123)160-112)170-102-69(113-53(5)127)81(141)75(135)59(41-118)155-102/h37,39,51-52,57-67,69-112,118-126,131,133-151H,9-36,38,40-50H2,1-8H3,(H,113,127)(H,114,128)(H,115,129)(H,116,130)(H,117,132)/b39-37+/t51?,52?,57-,58+,59?,60?,61?,62?,63?,64?,65?,66?,67?,69?,70?,71?,72?,73+,74+,75-,76-,77-,78-,79-,80-,81+,82+,83+,84?,85?,86+,87-,88-,89?,90?,91?,92+,93+,94+,95+,96-,97-,98-,99-,100?,101?,102?,103-,104-,105?,106+,107+,108+,109-,110-,111-,112-/m0/s1
SMILES (Click to copy)
CC(=O)NC1[C@@H](OC(CO)[C@@H](O[C@@H]2OC(CO)[C@H](O)[C@H](O[C@H]3OC(CO)[C@H](O)[C@H](O[C@@H]4OC(CO)[C@H](O)[C@H](O[C@H]5OC(CO)[C@H](O)[C@H](O)C5NC(C)=O)C4O[C@H]4OC(C)[C@@H](O)C(O)[C@@H]4O)C3NC(C)=O)C2O[C@H]2OC(C)[C@@H](O)C(O)[C@@H]2O)[C@@H]1O)O[C@H]1[C@@H](O)C(CO)O[C@@H](O[C@@H]2C(CO)O[C@@H](O[C@H]3[C@@H](O)C(CO)O[C@@H](O[C@@H]4C(CO)O[C@@H](OC[C@H](NC(=O)CCCCCCCCCCCCCCCCCCC)[C@H](O)/C=C/CCCCCCCCCCCCC)C(O)[C@H]4O)C3O)C(NC(C)=O)[C@H]2O)C1O

References

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 173
Rings 11
Aromatic Rings 0
Rotatable Bonds 69
Van der Waals Molecular Volume 2341.60
Topological Polar Surface Area 958.00
Hydrogen Bond Donors 34
Hydrogen Bond Acceptors 56
logP 8.99
Molar Refractivity 620.64