Gene/Proteome Database (LMPD)

LMPD ID
LMP010830
Gene ID
835825
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
phosphatidylserine decarboxylase 2
Gene Symbol
PSD2
Synonyms
MUL3.14; MUL3_14; phosphatidylserine decarboxylase 2; PHOSPHATIDYLSERINE DECARBOXYLASE 2; PSD2
Alternate Names
phosphatidylserine decarboxylase 2
Chromosome
5
EC Number
4.1.1.65

Proteins

phosphatidylserine decarboxylase 2
Refseq ID NP_200529
Protein GI 240256448
UniProt ID F4KAK5
mRNA ID NM_125101
Length 635
RefSeq Status REVIEWED
MGNGNSREAKESRRSRLRHKLQKFRIHRRHLRSSRNSAGMVIQRTVSAEDFSGIALLTLIGAEMKFKDKWLACVSFGEQTFRTEISDTTQKPIWNSEKKLLLEKNGPSLARVSVFETNRVARNKIIGYCELDIFDFVVQEPESTCKSFNLLDPTSSNVVGSIFLSCAIEDPVETERRFAKRILSIVDYNEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALQVSDKLNAMIHMTLCFDEGTGNQVMTGGFLTDRQASYGWMFKLSEWTHLSTYDVGLNTGSSASYIVVIDRKSKRLVEELIDSKIVLSMRAIYQSKIGLRLMDQGAKEILQRLSEKQGKKMSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDVAVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNAFLDGSLVIFRLAPQDYHRFHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTVAIISTAEFGKVAFVAIGATMVGSINFVRKEGEHVKKGDELGYFSFGGSTVICVFEKDAIGIDNDLLVNSGRSLETLVSVGMQLGVSTRTFARSTLI

Gene Information

Entrez Gene ID
835825
Gene Name
phosphatidylserine decarboxylase 2
Gene Symbol
PSD2
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0009705 IDA:TAIR C plant-type vacuole membrane
GO:0005509 IEA:InterPro F calcium ion binding
GO:0004609 IDA:TAIR F phosphatidylserine decarboxylase activity
GO:0006646 IEA:UniProtKB-UniPathway P phosphatidylethanolamine biosynthetic process

KEGG Pathway Links

KEGG Pathway ID Description
ath00564 Glycerophospholipid metabolism
ko00564 Glycerophospholipid metabolism
ath01100 Metabolic pathways

Domain Information

InterPro Annotations

Accession Description
IPR000008 C2 domain
IPR018247 EF-Hand 1, calcium-binding site
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
IPR003817 Phosphatidylserine decarboxylase-related

UniProt Annotations

Entry Information

Gene Name
phosphatidylserine decarboxylase 2
Protein Entry
PSD2_ARATH
UniProt ID
F4KAK5
Species
Arabidopsis

Comments

Comment Type Description
Catalytic Activity Phosphatidyl-L-serine = phosphatidylethanolamine + CO(2).
Cofactor Name=pyruvoyl group; Xref=ChEBI:CHEBI:45360; Evidence={ECO:0000250};
Disruption Phenotype No visible phenotype under normal growth conditions. {ECO:0000269|PubMed:17449644}.
Function Catalyzes the biosynthesis of phosphatidylethanolamine (PE) from phosphatidylserine. Contributes only to a minor proportion of PE production. {ECO:0000269|PubMed:17449644}.
Pathway Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2.
Sequence Caution Sequence=ABO26298.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=BAA97369.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Similarity Belongs to the phosphatidylserine decarboxylase family. {ECO:0000305}.
Similarity Contains 2 EF-hand domains. {ECO:0000255|PROSITE- ProRule:PRU00448}.
Subcellular Location Vacuole membrane {ECO:0000305|PubMed:17449644}; Peripheral membrane protein {ECO:0000305|PubMed:17449644}. Note=Tonoplast.
Tissue Specificity Highly expressed in flowers and at lower levels in leaves. {ECO:0000269|PubMed:17449644}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010830 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
240256448 RefSeq NP_200529 635 phosphatidylserine decarboxylase 2

Identical Sequences to LMP010830 proteins

Reference Database Accession Length Protein Name
GI:240256448 gnl TAIR 635 phosphatidylserine decarboxylase 2 [Arabidopsis thaliana]
GI:240256448 SwissProt F4KAK5.1 635 RecName: Full=Phosphatidylserine decarboxylase proenzyme 2; Contains: RecName: Full=Phosphatidylserine decarboxylase 2 beta chain; Contains: RecName: Full=Phosphatidylserine decarboxylase 2 alpha chain [Arabidopsis thaliana]

Related Sequences to LMP010830 proteins

Reference Database Accession Length Protein Name
GI:240256448 DBBJ BAA97369.1 615 phosphatidylserine decarboxylase [Arabidopsis thaliana]
GI:240256448 EMBL CDY52733.1 635 BnaC09g53330D [Brassica napus]
GI:240256448 EMBL CDY38275.1 635 BnaA10g11230D [Brassica napus]
GI:240256448 GenBank ABO26298.1 648 phosphatidylserine decarboxylase [Arabidopsis thaliana]
GI:240256448 GenBank EOA13074.1 629 hypothetical protein CARUB_v10026079mg [Capsella rubella]
GI:240256448 RefSeq XP_006280176.1 629 hypothetical protein CARUB_v10026079mg [Capsella rubella]