Gene/Proteome Database (LMPD)

LMPD ID
LMP011397
Gene ID
833520
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
transcription factor TT2
Gene Symbol
TT2
Synonyms
ATMYB123; ATTT2; MOK9.18; MOK9_18; MYB DOMAIN PROTEIN 123; MYB123; TRANSPARENT TESTA 2; TT2
Alternate Names
transcription factor TT2
Chromosome
5

Proteins

transcription factor TT2
Refseq ID NP_198405
Protein GI 15238535
UniProt ID Q9FJA2
mRNA ID NM_122946
Length 258
RefSeq Status REVIEWED
MGKRATTSVRREELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTKQPKRIKHSTNNENNVCVIRTKAIRCSKTLLFSDLSLQKKSSTSPLPLKEQEMDQGGSSLMGDLEFDFDRIHSEFHFPDLMDFDGLDCGNVTSLVSSNEILGELVPAQGNLDLNRPFTSCHHRGDDEDWLRDFTC

Gene Information

Entrez Gene ID
833520
Gene Name
transcription factor TT2
Gene Symbol
TT2
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IDA:TAIR C nucleus
GO:0005524 IEA:UniProtKB-KW F ATP binding
GO:0003682 IEA:InterPro F chromatin binding
GO:0003677 IEA:UniProtKB-KW F DNA binding
GO:0003700 ISS:TAIR F sequence-specific DNA binding transcription factor activity
GO:0006633 IMP:TAIR P fatty acid biosynthetic process
GO:0009813 IEA:UniProtKB-KW P flavonoid biosynthetic process
GO:0010023 IMP:TAIR P proanthocyanidin biosynthetic process
GO:0006970 IMP:TAIR P response to osmotic stress
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR009057 Homeodomain-like
IPR017930 Myb domain
IPR001005 SANT/Myb domain

UniProt Annotations

Entry Information

Gene Name
transcription factor TT2
Protein Entry
TT2_ARATH
UniProt ID
Q9FJA2
Species
Arabidopsis

Comments

Comment Type Description
Developmental Stage Highly expressed from the very early stages of embryogenesis to the globular stage, decreases rapidly from the late heart-torpedo stage and did not persist after the completion of embryogenesis.
Function Transcription activator, when associated with BHLH2/EGL3/MYC146, BHLH12/MYC1, or BHLH42/TT8. Involved in the control of flavonoid late metabolism in developing siliques. Plays a key role in determining the tissue-specific activation of leucoanthocyanidin reductase (BANYULS). {ECO:0000269|PubMed:15361138}.
Interaction Q9FT81:TT8; NbExp=3; IntAct=EBI-395778, EBI-395790;
Miscellaneous TT2 activity is tightly linked to the presence of TT8.
Sequence Caution Sequence=ABK28720.1; Type=Erroneous termination; Positions=259; Note=Translated as stop.; Evidence={ECO:0000305};
Similarity Contains 2 HTH myb-type DNA-binding domains. {ECO:0000255|PROSITE-ProRule:PRU00625}.
Subcellular Location Nucleus.
Subunit Interacts with BHLH2/EGL3/MYC146, BHLH12/MYC1 and BHLH42/TT8. {ECO:0000269|PubMed:15361138}.
Tissue Specificity Expressed at a high level in immature siliques and at a lower level in flowers. Undetected in young seedlings, roots, leaves and inflorescence stems.

Identical and Related Proteins

Unique RefSeq proteins for LMP011397 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
15238535 RefSeq NP_198405 258 transcription factor TT2

Identical Sequences to LMP011397 proteins

Reference Database Accession Length Protein Name
GI:15238535 EMBL CDH61642.1 258 unnamed protein product [Arabidopsis thaliana]
GI:15238535 EMBL CDH61665.1 258 unnamed protein product [Arabidopsis thaliana]
GI:15238535 GenBank AED37604.1 258 Sequence 42 from patent US 7880059
GI:15238535 GenBank AEQ40228.1 258 Sequence 534 from patent US 8030546
GI:15238535 GenBank AGM61065.1 258 Sequence 17 from patent US 8420889
GI:15238535 gnl TAIR 258 transcription factor TT2 [Arabidopsis thaliana]

Related Sequences to LMP011397 proteins

Reference Database Accession Length Protein Name
GI:15238535 GenBank ABK28720.1 259 unknown, partial [Arabidopsis thaliana]
GI:15238535 GenBank EFH44684.1 261 hypothetical protein ARALYDRAFT_493616 [Arabidopsis lyrata subsp. lyrata]
GI:15238535 GenBank EOA15731.1 263 hypothetical protein CARUB_v10006684mg [Capsella rubella]
GI:15238535 RefSeq XP_002868425.1 261 hypothetical protein ARALYDRAFT_493616 [Arabidopsis lyrata subsp. lyrata]
GI:15238535 RefSeq XP_010440735.1 261 PREDICTED: transcription factor TT2-like [Camelina sativa]
GI:15238535 RefSeq XP_010450385.1 261 PREDICTED: transcription factor TT2 [Camelina sativa]