Structure Database (LMSD)

Common Name
11-dehydro-2,3-dinor-TXB2
Systematic Name
2,3-dinor-9S,15S-dihydroxy-11-oxo-thromboxa-5Z,13E-dien-1-oic acid
Synonyms
LM ID
LMFA03030013
Formula
Exact Mass
Calculate m/z
340.18859
Sum Composition
Status
Curated

Classification

Biological Context

11-dehydro-2,3-dinor Thromboxane B2 (11-dehydro-2,3-dinor TXB2) is a metabolite of the TXA2 inactive metabolite TXB2 .1 It is formed from TXB2 by cytosolic aldehyde dehydrogenase (ALDH) and β-oxidation.1,2 Levels of 11-dehydro-2,3-dinor TXB2 are increased 5.2-fold in a surgery-induced rat model of tendon overuse.3

This information has been provided by Cayman Chemical

References

1. Roberts, L.J., II, Sweetman, B.J., and Oates, J.A. Metabolism of thromboxane B2 in Man. Identification of the major urinary metabolite. The Journal of Biological Chemisty 256(16), 8384-8393 (1981).
3. Markworth, J.F., Sugg, K.B., Sarver, D.C., et al. Local shifts in inflammatory and resolving lipid mediators in response to tendon overuse. FASEB J. 35(6), e21655 (2021).

String Representations

InChiKey (Click to copy)
PJAAKFHMQLYVGV-YCEKRRLLSA-N
InChi (Click to copy)
InChI=1S/C18H28O6/c1-2-3-4-7-13(19)10-11-16-14(8-5-6-9-17(21)22)15(20)12-18(23)24-16/h5-6,10-11,13-16,19-20H,2-4,7-9,12H2,1H3,(H,21,22)/b6-5-,11-10+/t13-,14-,15-,16+/m0/s1
SMILES (Click to copy)
C1[C@H](O)[C@H](C/C=C\CC(=O)O)[C@@H](/C=C/[C@@H](O)CCCCC)OC1=O

Other Databases

CHEBI ID
PubChem CID
Cayman ID

Calculated Physicochemical Properties

Heavy Atoms 24
Rings 1
Aromatic Rings 0
Rotatable Bonds 10
Van der Waals Molecular Volume 349.78
Topological Polar Surface Area 106.13
Hydrogen Bond Donors 3
Hydrogen Bond Acceptors 6
logP 3.06
Molar Refractivity 90.83

Admin

Created at
-
Updated at
-