Structure Database (LMSD)
Common Name
11-dehydro-2,3-dinor-TXB2
Systematic Name
2,3-dinor-9S,15S-dihydroxy-11-oxo-thromboxa-5Z,13E-dien-1-oic acid
Synonyms
LM ID
LMFA03030013
Formula
Exact Mass
Calculate m/z
340.18859
Sum Composition
Status
Curated
3D model of 11-dehydro-2,3-dinor-TXB2
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Biological Context
11-dehydro-2,3-dinor Thromboxane B2 (11-dehydro-2,3-dinor TXB2) is a metabolite of the TXA2 inactive metabolite TXB2 .1 It is formed from TXB2 by cytosolic aldehyde dehydrogenase (ALDH) and β-oxidation.1,2 Levels of 11-dehydro-2,3-dinor TXB2 are increased 5.2-fold in a surgery-induced rat model of tendon overuse.3
This information has been provided by Cayman Chemical
References
1. Roberts, L.J., II, Sweetman, B.J., and Oates, J.A. Metabolism of thromboxane B2 in Man. Identification of the major urinary metabolite. The Journal of Biological Chemisty 256(16), 8384-8393 (1981).
3. Markworth, J.F., Sugg, K.B., Sarver, D.C., et al. Local shifts in inflammatory and resolving lipid mediators in response to tendon overuse. FASEB J. 35(6), e21655 (2021).
String Representations
InChiKey (Click to copy)
PJAAKFHMQLYVGV-YCEKRRLLSA-N
InChi (Click to copy)
InChI=1S/C18H28O6/c1-2-3-4-7-13(19)10-11-16-14(8-5-6-9-17(21)22)15(20)12-18(23)24-16/h5-6,10-11,13-16,19-20H,2-4,7-9,12H2,1H3,(H,21,22)/b6-5-,11-10+/t13-,14-,15-,16+/m0/s1
SMILES (Click to copy)
C1[C@H](O)[C@H](C/C=C\CC(=O)O)[C@@H](/C=C/[C@@H](O)CCCCC)OC1=O
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
24
Rings
1
Aromatic Rings
0
Rotatable Bonds
10
Van der Waals Molecular Volume
349.78
Topological Polar Surface Area
106.13
Hydrogen Bond Donors
3
Hydrogen Bond Acceptors
6
logP
3.06
Molar Refractivity
90.83
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Created at
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Updated at
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