Structure Database (LMSD)

Common Name
Capsaicin
Systematic Name
8-Methyl-N-vanillyl-6E-nonenamide
Synonyms
LM ID
LMFA08020085
Formula
Exact Mass
Calculate m/z
305.199094
Sum Composition
Status
Curated



Classification

Biological Context

Capsaicin is a terpene alkaloid that has been found in Capsicum and has diverse biological activities.1,2,3,4 It induces inward currents in HEK293 cells expressing rat transient receptor potential vanilloid 1 (TRPV1; EC50 = 0.64 µM at neutral pH), an effect that can be blocked by the TRPV1 inhibitor A-425619.1 Capsaicin (10 and 50 µM) decreases LPS-induced prostaglandin E2 (PGE2) production, as well as reduces LPS- and IFN-induced nitric oxide (NO) release in isolated mouse peritoneal macrophages.2 Capsaicin induces substance P release in rat spinal cord slices with an EC50 value of 2.3 µM.3 It reduces acetylcholine- or phenylquinone-induced writhing (ED50s = 1.33 and 1.38 mg/kg, respectively, s.c.) but has no effect on the latency to paw withdrawal in the hot plate test in mice (ED50 = >20 mg/kg, s.c.).4 Formulations containing capsaicin have been used in the treatment of nerve pain associated with shingles.

This information has been provided by Cayman Chemical

References

1. Neelands, T.R., Jarvis, M.F., Han, P., et al. Acidification of rat TRPVI alters the kinetics of capsaicin responses. Mol. Pain 1, 28 (2005).
4. Hayes, A.G., Skingle, M., and Tyers, M.B. Effects of single doses of capsaicin on nociceptive thresholds in the rodent. Neuropharmacology 20(5), 505-511 (1981).

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Capsicum (#4071)
Magnoliopsida (#3398)
THE CONSTITUTION OF CAPSAICIN, THE PUNGENT PRINCIPLE OF CAPSICUM. III,
J. Am. Chem. Soc., 1923

String Representations

InChiKey (Click to copy)
YKPUWZUDDOIDPM-SOFGYWHQSA-N
InChi (Click to copy)
InChI=1S/C18H27NO3/c1-14(2)8-6-4-5-7-9-18(21)19-13-15-10-11-16(20)17(12-15)22-3/h6,8,10-12,14,20H,4-5,7,9,13H2,1-3H3,(H,19,21)/b8-6+
SMILES (Click to copy)
C1=CC(CNC(=O)CCCC/C=C/C(C)C)=CC(OC)=C1O

Other Databases

KEGG ID
HMDB ID
CHEBI ID
PubChem CID
Cayman ID
PDB ID
GuidePharm ID

Calculated Physicochemical Properties

Heavy Atoms 22
Rings 1
Aromatic Rings 1
Rotatable Bonds 9
Van der Waals Molecular Volume 320.87
Topological Polar Surface Area 58.56
Hydrogen Bond Donors 2
Hydrogen Bond Acceptors 3
logP 3.79
Molar Refractivity 88.95

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Updated at
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