Structure Database (LMSD)
Common Name
Palmitoyl Serotonin
Systematic Name
N-[2-(5-hydroxy-1H-indol-3-yl)ethyl]-hexadecanamide
Synonyms
- PA-5HT
- Palmitoyl 5HT
3D model of Palmitoyl Serotonin
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Biological Context
Palmitoyl serotonin is a hybrid molecule patterned after arachidonoyl serotonin (Catalog No. 70665). Arachidonoyl serotonin is a dual antagonist of fatty acid amide hydrolase (FAAH) and the transient receptor potential vanilloid-type 1 (TRPV1) channel, reducing both acute and chronic peripheral pain.1,2 The effects of replacing the arachidonoyl portion with the saturated 16-carbon palmitoyl moiety have not been studied. However, replacement of arachidonate with saturated 11- or 12-carbon fatty acids produces compounds that potently inhibit capsaicin-induced TRPV1 channel activation (IC50 = 0.76 μM) without blocking FAAH-mediated hydrolysis of arachidonoyl ethanolamine (IC50 > 50 μM).1
This information has been provided by Cayman Chemical
References
References
String Representations
InChiKey (Click to copy)
AKQOZSXOPVLUHA-UHFFFAOYSA-N
InChi (Click to copy)
InChI=1S/C26H42N2O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-26(30)27-19-18-22-21-28-25-17-16-23(29)20-24(22)25/h16-17,20-21,28-29H,2-15,18-19H2,1H3,(H,27,30)
SMILES (Click to copy)
C(NCCC1=CNC2=CC=C(O)C=C12)(=O)CCCCCCCCCCCCCCC
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
30
Rings
2
Aromatic Rings
2
Rotatable Bonds
17
Van der Waals Molecular Volume
438.22
Topological Polar Surface Area
65.12
Hydrogen Bond Donors
3
Hydrogen Bond Acceptors
4
logP
7.14
Molar Refractivity
127.41
Admin
Created at
22nd Nov 2020
Updated at
23rd Nov 2020