Structure Database (LMSD)

Common Name
Clarithromycin
Systematic Name
Synonyms
LM ID
LMPK04000014
Formula
Exact Mass
Calculate m/z
747.476894
Status
Curated




Classification

Biological Context

Clarithromycin is a polyketide synthase-derived semisynthetic macrolide antibiotic.1,2,3 It is active against methicillin-susceptible, but not methicillin-resistant, S. aureus (MIC50s = 0.06 and >128 µg/ml), S. pyogenes, L. monocytogenes, and B. pertussis (MIC50 = 0.015, 0.25, and ≤0.008 µg/ml, respectively), among others.1 Clarithromycin (25 mg/kg) decreases the number of colony-forming units (CFUs) in the spleen in a mouse model of M. avium infection.4 Formulations containing clarithromycin have been used in the treatment of bacterial infections.

This information has been provided by Cayman Chemical

References

1. Wilson, D.N. The A-Z of bacterial translation inhibitors. Crit. Rev. Biochem. Mol. Biol. 44(6), 393-433 (2009).

String Representations

InChiKey (Click to copy)
AGOYDEPGAOXOCK-KCBOHYOISA-N
InChi (Click to copy)
InChI=1S/C38H69NO13/c1-15-26-38(10,45)31(42)21(4)28(40)19(2)17-37(9,47-14)33(52-35-29(41)25(39(11)12)16-20(3)48-35)22(5)30(23(6)34(44)50-26)51-27-18-36(8,46-13)32(43)24(7)49-27/h19-27,29-33,35,41-43,45H,15-18H2,1-14H3/t19-,20-,21+,22+,23-,24+,25+,26-,27+,29-,30+,31-,32+,33-,35+,36-,37-,38-/m1/s1
SMILES (Click to copy)
[C@@H]1(O[C@@H]2O[C@@H](C[C@H](N(C)C)[C@H]2O)C)[C@@H](C)[C@@H]([C@@H](C)C(=O)O[C@@H]([C@](O)(C)[C@H](O)[C@@H](C)C(=O)[C@H](C)C[C@@]1(C)OC)CC)O[C@@H]1O[C@H]([C@H](O)[C@](C)(OC)C1)C

Other Databases

Wikipedia
KEGG ID
HMDB ID
CHEBI ID
PubChem CID
Cayman ID
PDB ID
GuidePharm ID

Calculated Physicochemical Properties

Heavy Atoms 52
Rings 3
Aromatic Rings 0
Rotatable Bonds 8
Van der Waals Molecular Volume 748.87
Topological Polar Surface Area 189.12
Hydrogen Bond Donors 4
Hydrogen Bond Acceptors 14
logP 6.45
Molar Refractivity 198.22

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