Structure Database (LMSD)
Common Name
KDN GD1a 2(d18:1/26:1(17Z))
Systematic Name
KDNα2-3Galβ1-3(KDNα2-6)GalNAcβ1-4Galβ1-4Glcβ-Cer(d18:1/26:1(17Z))
Synonyms
LM ID
LMSP0601DI08
Formula
Exact Mass
Calculate m/z
1865.028533
Sum Composition
Status
Active (generated by computational methods)
3D model of KDN GD1a 2(d18:1/26:1(17Z))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Main
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
NRBYFEGEPXZRLB-ZUFUWIDESA-N
InChi (Click to copy)
InChI=1S/C88H156N2O39/c1-4-6-8-10-12-14-16-18-19-20-21-22-23-24-25-26-27-29-31-33-35-37-39-41-62(102)90-52(53(97)40-38-36-34-32-30-28-17-15-13-11-9-7-5-2)49-118-82-72(111)70(109)76(59(47-94)121-82)125-83-73(112)71(110)75(60(48-95)122-83)124-81-63(89-51(3)96)77(69(108)61(123-81)50-119-87(85(114)115)42-54(98)64(103)78(127-87)66(105)56(100)44-91)126-84-74(113)80(68(107)58(46-93)120-84)129-88(86(116)117)43-55(99)65(104)79(128-88)67(106)57(101)45-92/h18-19,38,40,52-61,63-84,91-95,97-101,103-113H,4-17,20-37,39,41-50H2,1-3H3,(H,89,96)(H,90,102)(H,114,115)(H,116,117)/b19-18-,40-38+/t52-,53+,54-,55-,56+,57+,58+,59+,60+,61+,63+,64+,65+,66+,67+,68-,69-,70+,71+,72+,73+,74+,75-,76+,77+,78+,79+,80-,81-,82+,83-,84-,87+,88-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO[C@]4(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](O)[C@@H](O)C4)C(O)=O)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](O)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
References
Calculated Physicochemical Properties
Heavy Atoms
129
Rings
6
Aromatic Rings
0
Rotatable Bonds
64
Van der Waals Molecular Volume
1805.77
Topological Polar Surface Area
680.81
Hydrogen Bond Donors
25
Hydrogen Bond Acceptors
39
logP
10.47
Molar Refractivity
474.27
Admin
Created at
-
Updated at
26th Jul 2021