Structure Database (LMSD)

H H H OH HO O O OH
Common Name
(24R)-6,19-epidioxy-1alpha,24-dihydroxy-6,19-dihydrovitamin D3
Systematic Name
(7E)-(1S,3R,24R)-6,19-epidioxy-9,10-seco-5(10),7-cholestadiene-1,3,24-triol
Synonyms
  • (24R)-6,19-epidioxy-1alpha,24-di hydroxy-6,19-dihydrocholecalciferol
LM ID
LMST03020301
Formula
C27H44O5
Exact Mass
Calculate m/z
448.318875
Status
Active
Show lipids differing only in stereochemistry/bond geometry

Main

Classification

Category
Main Class
Sub Class
Sterol Lipids [ST]
Secosteroids [ST03]
Vitamin D3 and derivatives [ST0302]

String Representations

InChiKey (Click to copy)
DKYWDJRYWSGSCA-HDINTAEKSA-N
InChi (Click to copy)
InChI=1S/C27H44O5/c1-16(2)10-19(28)11-17(3)23-7-8-24-18(6-5-9-27(23,24)4)12-26-21-13-20(29)14-25(30)22(21)15-31-32-26/h12,16-17,19-20,23-26,28-30H,5-11,13-15H2,1-4H3/b18-12+/t17-,19-,20-,23-,24+,25+,26?,27-/m1/s1
SMILES (Click to copy)
[C@@H]1(O)CC2C(/C=C3/[C@]4([H])CC[C@@]([C@@](C)([H])C[C@H](O)CC(C)C)([H])[C@@]4(C)CCC/3)OOCC=2[C@@H](O)C1

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
synthetic construct (#32630)
Syntheses and differentiating action of vitamin D endoperoxides. Singlet oxygen adducts of vitamin D derivatives in human myeloid leukemia cells (HL-60),
J Med Chem, 1985
Pubmed ID: 2993611

Other Databases

CHEBI ID
183032
LIPIDBANK ID
VVD0328
PubChem CID
9547451

Calculated Physicochemical Properties

Heavy Atoms 32
Rings 4
Aromatic Rings 0
Rotatable Bonds 6
Van der Waals Molecular Volume 464.89
Topological Polar Surface Area 83.29
Hydrogen Bond Donors 3
Hydrogen Bond Acceptors 5
logP 6.14
Molar Refractivity 127.13

Admin

Created at
-
Updated at
31st Mar 2022